Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_024354.1 Length=149162 Score E Sequences producing significant alignments: (Bits) Value seq974 104 2e-17 >seq974 Length=31311 Score = 104 bits (114), Expect = 2e-17 Identities = 348/532 (65%), Gaps = 16/532 (3%) Strand=Plus/Plus Query 121155 TCACCAGACTCAATCAGTACGCAAGAACTAAACTGACGGGTCGGGGTACGAACACCCGCC 121214 |||||| |||| ||||||||||| || || ||||||||||| ||||| || || || | | Sbjct 283 TCACCACACTCGATCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTGCGCACGCCAGAC 342 Query 121215 ATGATCGGGGTCGGCAAAGACACCTTCATCAGCGATACGTTCTCGTACAGGTCAACAAT- 121273 ||||| || || |||| ||| | ||| | | |||||| ||||| | ||| | Sbjct 343 ATGATTGGCGTAGGCAGAGAAATCTTGAACGTCGATACCGCATCGTAGA----AACGCTT 398 Query 121274 -ACGT--TCCAGACGGGTCTTTTTGTCTTCCTGTGACAAAAGGCCCATTGCAATCAGCAT 121330 |||| ||||||||||| | | | || || |||| || | ||| || Sbjct 399 CACGTAATCCAGACGGGTGTCACGCGGATAGTTAGAGAACAGGCAGGCGGCCACCAGAAT 458 Query 121331 -CAGCGCCATCTGAGGGGATTCGTAAATCTCCCCGGTGACACGGTTTTTGACCAGGTACT 121389 || | | ||| | | |||||| ||||| ||||| |||||||| | |||||||| | Sbjct 459 ATAGAG-GAACTGGGCGCTTTCGTAGATCTCACCGGTTACACGGTTCTGAACCAGGTATT 517 Query 121390 TATCTTCGTACTGACGCATCGCTGCGTAAGTGTAGTCGAAGTCACGATCATGACGGATAC 121449 | ||||| ||| || ||| ||||| | | ||| | ||| || ||| |||| Sbjct 518 TGCCTTCGAGCTGCTTCACCGCCGCGTAGGAGAAGTTCATGTCGCGCCAGTGATCGATAA 577 Query 121450 AACCATCCAGATAGTTGATTTCCTCAGACGTATAGTCATCCAGCAGGTGACGATCGTATT 121509 | || | || | | || || || ||||||||| |||||||| || ||||||| Sbjct 578 ACCCGTTCATCTGCTCGAACTCTTCTTCCGTATAGTCTTCCAGCAGATGCGTGTCGTATT 637 Query 121510 TACCGTTGTCAACCTGCTTCGCAATTTGGAACAGGAGGGAAAC--AGGTTTGAAATCCCC 121567 | || |||||| ||| | | || | | | | | || | || | || Sbjct 638 TGCCCAGCTCAACCATTTTCACCACGTG--ATCGTAAAGCTTCGGCGGCTCAAACTGGCC 695 Query 121568 ATATGCCTCTTTACGGATCTTGAACAGCAGCAGTCGTGCAGCAGCGTACTGGTAATCCGG 121627 || || | |||||| | | ||| | | ||| |||||||| |||||| |||||||| Sbjct 696 GTAGGCTTTTTTACGCAGGTGGAAAATCGCCAGACGTGCAGCGAGGTACTGATAATCCGG 755 Query 121628 ATTCTGAACACTA-ATCAGGTCGGATGCCGCCTTAATCAGGGTTTCGTGGAT 121678 | || | | || ||||| | ||||| ||||| | ||||||||||| Sbjct 756 -TGCTTCGCGGGAGATGAGGTCCGCCGCCGCTTTAATGATCGTTTCGTGGAT 806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477179699005280