Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_024354.1
Length=149162
Score E
Sequences producing significant alignments: (Bits) Value
seq974 104 2e-17
>seq974
Length=31311
Score = 104 bits (114), Expect = 2e-17
Identities = 348/532 (65%), Gaps = 16/532 (3%)
Strand=Plus/Plus
Query 121155 TCACCAGACTCAATCAGTACGCAAGAACTAAACTGACGGGTCGGGGTACGAACACCCGCC 121214
|||||| |||| ||||||||||| || || ||||||||||| ||||| || || || | |
Sbjct 283 TCACCACACTCGATCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTGCGCACGCCAGAC 342
Query 121215 ATGATCGGGGTCGGCAAAGACACCTTCATCAGCGATACGTTCTCGTACAGGTCAACAAT- 121273
||||| || || |||| ||| | ||| | | |||||| ||||| | ||| |
Sbjct 343 ATGATTGGCGTAGGCAGAGAAATCTTGAACGTCGATACCGCATCGTAGA----AACGCTT 398
Query 121274 -ACGT--TCCAGACGGGTCTTTTTGTCTTCCTGTGACAAAAGGCCCATTGCAATCAGCAT 121330
|||| ||||||||||| | | | || || |||| || | ||| ||
Sbjct 399 CACGTAATCCAGACGGGTGTCACGCGGATAGTTAGAGAACAGGCAGGCGGCCACCAGAAT 458
Query 121331 -CAGCGCCATCTGAGGGGATTCGTAAATCTCCCCGGTGACACGGTTTTTGACCAGGTACT 121389
|| | | ||| | | |||||| ||||| ||||| |||||||| | |||||||| |
Sbjct 459 ATAGAG-GAACTGGGCGCTTTCGTAGATCTCACCGGTTACACGGTTCTGAACCAGGTATT 517
Query 121390 TATCTTCGTACTGACGCATCGCTGCGTAAGTGTAGTCGAAGTCACGATCATGACGGATAC 121449
| ||||| ||| || ||| ||||| | | ||| | ||| || ||| ||||
Sbjct 518 TGCCTTCGAGCTGCTTCACCGCCGCGTAGGAGAAGTTCATGTCGCGCCAGTGATCGATAA 577
Query 121450 AACCATCCAGATAGTTGATTTCCTCAGACGTATAGTCATCCAGCAGGTGACGATCGTATT 121509
| || | || | | || || || ||||||||| |||||||| || |||||||
Sbjct 578 ACCCGTTCATCTGCTCGAACTCTTCTTCCGTATAGTCTTCCAGCAGATGCGTGTCGTATT 637
Query 121510 TACCGTTGTCAACCTGCTTCGCAATTTGGAACAGGAGGGAAAC--AGGTTTGAAATCCCC 121567
| || |||||| ||| | | || | | | | | || | || | ||
Sbjct 638 TGCCCAGCTCAACCATTTTCACCACGTG--ATCGTAAAGCTTCGGCGGCTCAAACTGGCC 695
Query 121568 ATATGCCTCTTTACGGATCTTGAACAGCAGCAGTCGTGCAGCAGCGTACTGGTAATCCGG 121627
|| || | |||||| | | ||| | | ||| |||||||| |||||| ||||||||
Sbjct 696 GTAGGCTTTTTTACGCAGGTGGAAAATCGCCAGACGTGCAGCGAGGTACTGATAATCCGG 755
Query 121628 ATTCTGAACACTA-ATCAGGTCGGATGCCGCCTTAATCAGGGTTTCGTGGAT 121678
| || | | || ||||| | ||||| ||||| | |||||||||||
Sbjct 756 -TGCTTCGCGGGAGATGAGGTCCGCCGCCGCTTTAATGATCGTTTCGTGGAT 806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 477179699005280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |