Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_024365.1 Length=51090 Score E Sequences producing significant alignments: (Bits) Value seq997 80.6 9e-11 >seq997 Length=29618 Score = 80.6 bits (88), Expect = 9e-11 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 4887 GGCGGCTATACCGGTGACGGCGGCAAGTTCCAGCCGAAGGGCGTTGTGCACGGCGGTGAG 4946 ||||||||||| || || ||||| || | ||| ||||| |||||||| |||||||||||| Sbjct 2643 GGCGGCTATACGGGAGATGGCGGTAAATACCAACCGAAAGGCGTTGTACACGGCGGTGAG 2584 Query 4947 TTTGTCGTGAAAAAGGAAG 4965 ||||| | | ||||||| Sbjct 2583 TTTGTGTTTACGAAGGAAG 2565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163362919683056