Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_024369.2 Length=41569 Score E Sequences producing significant alignments: (Bits) Value seq813 141 2e-29 >seq813 Length=55966 Score = 141 bits (156), Expect = 2e-29 Identities = 182/251 (73%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 38194 ATGGCAAGCAGAGGTGTAAACAAGGTGATCTTAATTGGTCACCTTGGTCAAGATCCAGAG 38253 ||||| |||||||| |||||||||||||| | | ||| | || || || || || || Sbjct 13783 ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAA 13724 Query 38254 GTGCGCTATCTACCAAGCGGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGTT 38313 || ||||| | || || || |||||||| || ||||| || | || || || || Sbjct 13723 GTACGCTACATGCCGAGTGGTGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCC 13664 Query 38314 TGGCGGGATAAGCAAACCGGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGTTACTTTG 38373 ||||| ||||| ||||| || |||||| | || || |||||||| || || Sbjct 13663 TGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACTGAATGGCACCGCGTGGTGCTG 13604 Query 38374 TTTGGGAAGCTGGCTGAAGTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTATATT 38433 ||||| || ||||| |||||||| || || || || || ||||| ||||| || ||||| Sbjct 13603 TTTGGCAAACTGGCAGAAGTTGCCGGTGAGTATCTGCGTAAAGGTTCTCAGGTCTATATC 13544 Query 38434 GAAGGCCAGCT 38444 |||||||| || Sbjct 13543 GAAGGCCAACT 13533 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132896368748668