Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_024385.1
Length=28193
Score E
Sequences producing significant alignments: (Bits) Value
seq1512 179 7e-41
>seq1512
Length=4801
Score = 179 bits (198), Expect = 7e-41
Identities = 337/494 (68%), Gaps = 6/494 (1%)
Strand=Plus/Minus
Query 22624 TCTTTGATACGTTGTGGtttttttATAACCAACTAATACATCTTCTTTTTCTAAAATTTC 22683
||| | ||| ||| |||| | |||||||||| || || || | ||||| | |||||
Sbjct 4214 TCTCTTATATGTTTTGGTCTGTTTATAACCACTAAAAACGTCATGCTTTTCAATTATTTC 4155
Query 22684 AACAGCTAGATTATACTTTATATCACTTACCTGTTTACTGTATAAATAGT---TCATTCG 22740
|||||||||||| |||| ||| | | |||| |||||||| | || ||
Sbjct 4154 TTTAGCTAGATTATATTTTAAATCTGAAATTTCTTTAGAATATAAATAATCTCTCTTT-- 4097
Query 22741 ATCATTGCCAAAACTATTGACTAACAACTTCAATTCGTCATCAACAGTTTTATTTTCTTT 22800
| ||| || ||| || | | ||||||||| |||||| || || ||||||||
Sbjct 4096 -TTATTACCGAAAGAGTTAATCAGCAACTTCAAAAAGTCATCTGTTGTCTTGTTTTCTTT 4038
Query 22801 TTCTCTAATTTCAATAAACTCATCACGACTAACAATTAGCGTTTTTATCCATTCCCTGTC 22860
|| |||| || ||||||| ||| |||||| || |||| ||||| || | |||
Sbjct 4037 CTCCTTAATCTCGGTAAACTCTGTACGTGAAACAATAAGGCTTTTAATCCACTCACGGTC 3978
Query 22861 TTGGTTTAAAACACGGTTAAACATATCAGTAATTGTTTTATCTAAGTCATTATAAACAAC 22920
||| | ||| || | ||| | || || || |||||||| |||||| ||
Sbjct 3977 TTGAGAGATAACTCGTTCAAAAGCGTTGGTTATATCCTTGTCTAAGTCGTTATAATATAC 3918
Query 22921 ATCGATGCCGTTAATCATCAGTTCCGCAGTAATTGCACCGCCACCACCGAAGACATCGTA 22980
|| | ||| || | || ||| | |||||||| ||||| || ||||||| |||||
Sbjct 3917 TTCTAAGCCATTTAAAATACATTCGGATGTAATTGCTCCGCCTCCTCCGAAGATGTCGTA 3858
Query 22981 AACTGTCTTATCCGCTCCAAAATTCTGCTTGATGATCTCTACAATCTTTTTGCTAATTTT 23040
| | ||| || | ||||| ||||| ||||| ||||| || || || ||||| || ||
Sbjct 3857 TATCGGCTTGTCTGTGCCAAAGTTCTGTTTGATAATCTCAACTATTTTCTTGCTTATCTT 3798
Query 23041 CTTTTTGCTACCAACATAAGGTAAACCAACTGGCTTTCCTTTGCGGATTTTCTTTTCGTC 23100
|| ||||| || || ||||| |||| || || ||||| | ||||||||| |||||
Sbjct 3797 TTTCTTGCTTCCTTGGTATGGTAATCCAATAGGTTTACCTTTTCTGATTTTCTTCTCGTC 3738
Query 23101 TAGTGTCAGCATTA 23114
|| | |||||||
Sbjct 3737 TAAACTAAGCATTA 3724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 90097331061032
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |