Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq486 84.2 5e-11
>seq486
Length=217039
Score = 84.2 bits (92), Expect = 5e-11
Identities = 266/407 (65%), Gaps = 4/407 (1%)
Strand=Plus/Minus
Query 110751 GGCTCATTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTT 110810
||| | || || |||| ||||| || ||||| | || ||||| || ||| |||| |||
Sbjct 176134 GGCGCCTTCGCCGTCTACCTCGAGCCGTGGCACGCTGACATATTCGAGTTCCTAGA-CTT 176076
Query 110811 CGTAAAAATCAAGGATTT-GAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGAT 110869
|| | || || || ||| | || || || | || ||||| |||||||
Sbjct 176075 GAAGAAGAACACGGGCAAAGAGGAAGTGCGCGCGCGAGAGCTGTTCTATGCTCTGTGGAT 176016
Query 110870 TTCAGATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCA 110929
|||||| |||||||||| | ||| | | || | |||| |||||||| |||||
Sbjct 176015 CTCAGATCTATTCATGAAGAGGGTTGAGAACAACGAGGAGTGGAGCCTTATGTGCCCTCA 175956
Query 110930 TCGTTCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATA 110989
||||| | ||||| | ||| | || ||||| | | || | |||||
Sbjct 175955 CGACAGCCCTGGCTTGGCTGATTGTTGGGGAGATGAATTTGATGCATTATATCAGAAATA 175896
Query 110990 TGAAAAAGAAGGCAAGTTTCGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCT 111049
|||| ||||||| | |||| ||| || | | |||||| || ||| || |
Sbjct 175895 TGAACAAGAAGGTAGGTTTGTTAAAAAAGTCCGCGCTCAAATCCTATGGAAGGCTATTAT 175836
Query 111050 TGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGAT-CATATTAATCGCA 111108
||| ||||||| || ||||||||||| || || | || |||||| ||| || | |
Sbjct 175835 TGAGGCACAAGTAGAGACTGGAACTCCATACATGCTTTACAAAGATGCAT-GCAACAGAA 175777
Query 111109 AATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAATTTGTGC 111155
| ||||||| |||||| ||||| || || | || ||| | |||
Sbjct 175776 AGAGCAATCAAAAGAATTTGGGAACCATCAAATGCAGCAATCTATGC 175730
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186785520366034
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |