Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq197 125 2e-23
>seq197
Length=620651
Score = 125 bits (138), Expect = 2e-23
Identities = 164/221 (74%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| ||| ||| || || || ||||| || |||||| ||||||| ||| ||| |||
Sbjct 448586 CAGATCTTTGTCAAGACTCTGACGGGAAAGACCATCACTCTGGAAGTTGAAGCTTCAGAC 448527
Query 206233 A-CAGTC-GAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCT 206289
| || | |||| || ||||| || ||| ||||| ||||| |||||| || |||
Sbjct 448526 ATCATTGAGAAT--GTCAAAGCCAA-GATCCAAGACAAAGAGGGAATTCCCCCAGACCAG 448470
Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349
|| || | ||||||||||| || ||| | || ||||| | || ||| |||| ||||||
Sbjct 448469 CAGAGGTTGATCTTCGCCGGCAACCAGCTAGAGGATGGTCGCACCTTGTCCGACTACAAC 448410
Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390
| ||||| |||||||| || || ||||||||| | || ||
Sbjct 448409 ATTCAGAAGGAGTCTACCCTCCATCTTGTTTTGCGTCTGCG 448369
Score = 111 bits (122), Expect = 4e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || || || || |||||| ||||||| ||| ||| ||||| ||||
Sbjct 446917 AAAACCCTAACTGGCAAGACAATCACTCTGGAAGTTGAAGCTTCAGACACCATCGAGAAT 446858
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| || ||||| || || ||| || |||||||||||
Sbjct 446857 GTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCCGACCAGCAGCGACTTATCTTC 446798
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| || || | ||||| || | || ||| | || || || |||||||||||||
Sbjct 446797 GCCGGTAAACAACTAGAAGACGGCCGTACATTGTCAGACTATAATATCCAGAAAGAGTCG 446738
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
||||||||| | || ||| | || ||
Sbjct 446737 ACTCTTCACTTGGTATTGCGTCTGCG 446712
Score = 111 bits (122), Expect = 4e-19
Identities = 148/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || || || || |||||| ||||||||||| ||| ||||| ||||
Sbjct 449074 AAAACCCTAACTGGCAAGACAATCACTCTGGAAGTGGAAGCTTCAGACACCATCGAGAAT 449015
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| || ||||| || || ||| || |||||||||||
Sbjct 449014 GTGAAGGCCAAGATCCAAGACAAGGAAGGCATCCCTCCCGACCAGCAGCGACTTATCTTC 448955
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| || || | ||||| || | || ||| | || || || |||||||||||||
Sbjct 448954 GCCGGTAAACAACTAGAAGACGGCCGTACATTGTCTGACTATAATATCCAGAAAGAGTCA 448895
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390
|| |||||| | || ||| | || ||
Sbjct 448894 ACCCTTCACTTGGTATTGCGTCTGCG 448869
Score = 107 bits (118), Expect = 5e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
|| || || || ||||| || |||||| ||||||| ||| ||| ||||| ||||
Sbjct 446461 AAGACTCTGACGGGAAAGACCATCACTCTGGAAGTTGAAGCTTCGGACACCATCGAGAAT 446402
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|||||| ||||| || || || || || ||| || ||| || | || ||||||
Sbjct 446401 GTAAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAGCAGCGTCTCATCTTC 446342
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
||||| || ||| |||| ||||| | || ||| |||| |||||| |||| || |||||
Sbjct 446341 GCCGGTAAACAGCTGGAGGATGGTCGCACCTTGTCCGACTACAACATCCAAAAGGAGTCC 446282
Query 206365 ACTCTTCACCTTGTTTT 206381
|| |||||| | || ||
Sbjct 446281 ACCCTTCACTTGGTATT 446265
Score = 102 bits (112), Expect = 2e-16
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
|||||||| || || || || || ||||| ||||||||||| || || | | |||
Sbjct 449789 CAGATATTCGTGAAGACCCTGACTGGGAAAACCATCACTTTGGAGGTCGAGCCTGCAGAC 449730
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| |||| || ||| ||||| || || ||||| || || ||| ||| ||
Sbjct 449729 ACCATCGAGAACGTTAAGGCGAAGATCCAGGACAAAGAGGGCATCCCGCCCGACCAGCAG 449670
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || |||||||| || |||||| | ||||| || | || ||| |||| |||||| ||
Sbjct 449669 CGTCTCATCTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACCTTGTCCGACTACAACATC 449610
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391
||||||||||| || || ||| | || || | || |||
Sbjct 449609 CAGAAAGAGTCCACCCTGCACTTGGTGCTGCGTCTGCGA 449571
Score = 98.7 bits (108), Expect = 2e-15
Identities = 146/207 (71%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244
||||| || || || || || || || ||||||||||| || |||||| | ||
Sbjct 449549 AAAACCCTGACTGGCAAGACAATTACCCTGGAAGTGGAAGCCTCAGACACAATTGAGAAT 449490
Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304
|| ||| ||||| ||||| ||||| |||||| || ||| || || | |||||
Sbjct 449489 GTGAAGGCCAAGATCCAAGACAAAGAGGGAATTCCCCCAGACCAGCAGAGGTTGATCTTT 449430
Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364
|| || || |||||||| ||||| | || || | || |||||| |||||||||||||
Sbjct 449429 GCAGGCAAACAGTTGGAGGATGGCCGCACCCTGTCTGACTACAACATCCAGAAAGAGTCC 449370
Query 206365 ACTCTTCACCTTGTTTTGAGACTTCGA 206391
|| || ||| | || || | || |||
Sbjct 449369 ACCCTGCACTTGGTGCTGCGTCTGCGA 449343
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
|| || | ||| || | ||||||||| ||||||||||||| ||||||||| | ||| ||
Sbjct 446712 CGCAGACGCAATACCAAGTGAAGAGTCGACTCTTTCTGGATATTATAGTCTGACAATGTA 446771
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
| || ||||| || || || |||||||||||||| || || ||
Sbjct 446772 CGGCCGTCTTCTAGTTGTTTACCGGCGAAGATAAGTCGCTGCTG 446815
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
|| || | ||| || | |||||| || ||||||||||||| ||||||||||| ||| ||
Sbjct 447396 CGCAGACGCAATACCAAGTGAAGGGTTGACTCTTTCTGGATATTATAGTCAGACAATGTA 447455
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
| || ||||| || || || |||||||||||||| || || ||
Sbjct 447456 CGGCCGTCTTCTAGTTGTTTACCGGCGAAGATAAGTCGCTGCTG 447499
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
|| || | ||| || | |||||| || ||||||||||||| ||||||||||| ||| ||
Sbjct 448869 CGCAGACGCAATACCAAGTGAAGGGTTGACTCTTTCTGGATATTATAGTCAGACAATGTA 448928
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
| || ||||| || || || |||||||||||||| || || ||
Sbjct 448929 CGGCCGTCTTCTAGTTGTTTACCGGCGAAGATAAGTCGCTGCTG 448972
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181793635110274
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |