Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_025425.1
Length=163424
Score E
Sequences producing significant alignments: (Bits) Value
seq236 167 2e-36
seq974 129 6e-25
seq637 125 7e-24
>seq236
Length=545527
Score = 167 bits (184), Expect = 2e-36
Identities = 143/177 (81%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 53990 TTCGGTAAAGGTACGCGCGATAACGTCACGCTGCTGGTCTGGAGTCAGACTATTGAAGCG 54049
||| ||||||||||||||||||||||| |||||||| ||||| |||||| ||||||||
Sbjct 30886 TTCAGTAAAGGTACGCGCGATAACGTCGCGCTGCTGTTCTGGGGTCAGAGAGTTGAAGCG 30827
Query 54050 CACTGCGTAACCAGAAACGCGAATTGTAAGCTGCGGGTACTTCTCAGGATGTTCAACAGC 54109
|| || |||||||| |||||||| || ||||||||||| || || || || ||||| ||
Sbjct 30826 TACCGCATAACCAGACACGCGAATGGTCAGCTGCGGGTATTTTTCTGGGTGCTCAACCGC 30767
Query 54110 GTCCAGCAACATTTCTCGTAACAATACGTTAACATTCAAATGCTGGCCACCTTCGAC 54166
||||| || | |||| || || |||||| || || | ||||| |||||||| ||
Sbjct 30766 GTCCATCAGCGTTTCGCGGCGCAGTACGTTTACGTTAAGGTGCTGACCACCTTCCAC 30710
>seq974
Length=31311
Score = 129 bits (142), Expect = 6e-25
Identities = 246/357 (69%), Gaps = 8/357 (2%)
Strand=Plus/Plus
Query 135415 TTGTTCTTTAACACAATCAGACTTTCAAACTCTAAATGCCACATTGGGTAATAGAGAGTC 135474
||||| || | || | ||| ||||| | || | |||||||| ||||| | || |||
Sbjct 13 TTGTTTTTCAGGACCAGCAGGCTTTCCACTTCCAGGTGCCACATAGGGTAGAACAGGGTC 72
Query 135475 GCCGCCCCGCCACGAATACCGCCTTGTGAGCATGACTTAACGGCAGTCTGAAAATGTTTC 135534
|| || ||||| || | ||||| || ||||| || || || || ||||| || || ||
Sbjct 73 GCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTTACCGCCGTCTGGAAGTGCTTA 132
Query 135535 CAGAATGGGATAACGCCAGTATGACGAA--CTTCACCATGCC-CGATCTTAGAT-CCTTC 135590
|||| |||||| ||| || || ||| ||||||| ||| ||| | | ||
Sbjct 133 TAGAACGGGATACAGCCGGTGTG--GAATGCTTCACC--GCCGCGAATCGGGCTGCCCAG 188
Query 135591 CGCGCGAATCATGCCAGCGTTGATACCGATACCCGCACGCTTGCTAATATACTTGATGAT 135650
||| || || || |||||||| |||||||| ||||||| | || || || | |||
Sbjct 189 CGCACGGATGCGACCGGCGTTGATGCCGATACCGGCACGCTGGGAAACGTATTTCACGAT 248
Query 135651 TGCATTTGCTGTTTCGTTGATGCCCTGCAATGAGTCATCACTTTCAATCACCACACACGA 135710
|| | | || |||||||| | || |||| ||| || |||| || || ||
Sbjct 249 GGCGCTGGACGTGGCGTTGATGGAATCCAGGCTGTCACCACACTCGATCAGTACGCAGGA 308
Query 135711 ACTAAATTGGCGTGTTGGGGTACGCACACCAGCCATAATCGGAGTAGGCAGAGAGAT 135767
|| || || || |||||||| ||||| |||| ||| || || ||||||||||| ||
Sbjct 309 GCTGAACTGACGGGTTGGGGTGCGCACGCCAGACATGATTGGCGTAGGCAGAGAAAT 365
>seq637
Length=122170
Score = 125 bits (138), Expect = 7e-24
Identities = 131/172 (76%), Gaps = 0/172 (0%)
Strand=Plus/Plus
Query 53994 GTAAAGGTACGCGCGATAACGTCACGCTGCTGGTCTGGAGTCAGACTATTGAAGCGCACT 54053
|| || ||||| | ||||||||| ||||||| ||| |||||| || || || |||
Sbjct 107119 GTGAAAGTACGGGTGATAACGTCCTGCTGCTGTTCTTTAGTCAGGGAGTTAAAACGTACT 107178
Query 54054 GCGTAACCAGAAACGCGAATTGTAAGCTGCGGGTACTTCTCAGGATGTTCAACAGCGTCC 54113
||||| ||||| || || || || ||||| || || |||||||||||||| | || ||
Sbjct 107179 GCGTAGCCAGATACACGGATGGTCAGCTGAGGATATTTCTCAGGATGTTCCATCGCATCG 107238
Query 54114 AGCAACATTTCTCGTAACAATACGTTAACATTCAAATGCTGGCCACCTTCGA 54165
|||| |||||| || || |||||| || |||| ||||| ||||||||||
Sbjct 107239 AGCAGCATTTCACGGTTCATTACGTTCACGTTCAGGTGCTGACCACCTTCGA 107290
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 522817075564160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |