Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq754 140 3e-28 >seq754 Length=71200 Score = 140 bits (154), Expect = 3e-28 Identities = 159/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 142240 ATCTTCGGTCATCAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAG 142299 || || || || |||||||| |||||| | ||||||| ||||| | | || ||| Sbjct 66100 ATTTTTGGCCACCAGATGCGCTTCAATTTACAGGAAGGCTTCCCTCTGGTGACGACTAAG 66159 Query 142300 AAGCTGC-ATCTGAAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAA 142358 ||||| ||||| |||||||| ||||| || |||||||| |||||||||| || Sbjct 66160 C-GCTGCCATCTGCGCTCGATCATTCATGAACTGCTCTGGTTCCTGCAAGGCGATACCAA 66218 Query 142359 CATCAAGTATCTTCACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGG 142418 | | |||||| ||||| |||||||| |||||||| |||||||| |||| || || Sbjct 66219 CGTTGCGTATCTGCACGAAAACAACGTCTCCATCTGGGACGAATGGGCAGATGAAAACGG 66278 Query 142419 CAACCTCGGACCTGTCTACGGCAAGCAGTGG 142449 |||||| || || || ||||||||||||||| Sbjct 66279 CAACCTGGGCCCGGTTTACGGCAAGCAGTGG 66309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500487976305440