Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq813 93.3 1e-14 >seq813 Length=55966 Score = 93.3 bits (102), Expect = 1e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 230 ACCACGATTTCAGTTGTGTAGCGATCAACGCCAGCCTGGTCCTGCCACTTGCGCGTTTGC 289 ||||| | ||| || ||||| ||| |||| | ||| || ||| || || || || Sbjct 13473 ACCACAACTTCGGTGGTGTACTTCTCAGCGCCGGACTGATCGGTCCATTTACGGGTGCGC 13532 Query 290 AGCGCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTACTGGCTGGCGATTTCTGCC 349 || |||||| || | |||| ||||| ||||| |||| | ||| | ||||||| Sbjct 13533 AGTTGGCCTTCGATATAGACCTGAGAACCTTTACGCAGATACTCACCGGCAACTTCTGCC 13592 Query 350 AGCTTTCCGAAGATGACCACGCGGTGCCATTCCGTTTTTTCTTTCTTCTCCCCTGTCTGC 409 || || || || | ||||||||||||||||| || | |||||| |||| || ||| Sbjct 13593 AGTTTGCCAAACAGCACCACGCGGTGCCATTCAGTCTGCTCTTTCATCTCACCGGTCGCT 13652 Query 410 TTATCCTTCCAGGTTTCAGACGTGGC 435 ||||| ||||| ||| || || || Sbjct 13653 TTATCACGCCAGGATTCGGAAGTAGC 13678 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135398715438164