Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_025434.1
Length=62699
Score E
Sequences producing significant alignments: (Bits) Value
seq997 297 8e-76
>seq997
Length=29618
Score = 297 bits (328), Expect = 8e-76
Identities = 369/503 (73%), Gaps = 13/503 (3%)
Strand=Plus/Minus
Query 25507 GTTCTGGCGCTG--ATTGCCGCAGGGGCTTCTGCGCCTGAAATCCTGGATCAGTTTCTGG 25564
||||||| |||| |||| || || ||| |||| | | ||| || ||||||||||||
Sbjct 20895 GTTCTGGGGCTGGTATTG--GCTGGTGCTCCTGCATCCGTAATTCTCGATCAGTTTCTGA 20838
Query 25565 ATGAAAAAGAAGGTAACCACACCACGGCATACCGTGATGGTGCGGGGATCTGGACCATCT 25624
|||||||||| |||||| | |||||| ||| ||||||| || || ||||| || |
Sbjct 20837 ATGAAAAAGAGGGTAACAGCCTCACGGCCTACAAAGATGGTGGTGGTATTTGGACTATTT 20778
Query 25625 GCCGTGGAGCCACCCGGGTGGATGGTAAGCCTGTGATTCCTGGCATGAAGCTGTCGAAGG 25684
|||| || || || ||| ||| |||| || || | | |||||||| || | |||
Sbjct 20777 GCCGCGGCGCAACGATGGTTGATCGTAAACCGGTTGTGCAGGGCATGAAATTGACACAGG 20718
Query 25685 AAAAATGCGACCGGGTTAACGCTATCGAACGGGATAAGGCGCTGGCATGGGTGGAGAAAA 25744
|||||| | | ||| || ||||||||||| ||||||| ||||||||||| || |
Sbjct 20717 CCAAATGCAATCTGGTGAATGCTATCGAACGCAATAAGGCTCTGGCATGGGTTGACCGCA 20658
Query 25745 ACATCAAAGTGCCACTGACTGAACCCCAGAAAGCGGGTATTGCGTCATTCTGTCCTTACA 25804
| || || || || || ||||| |||||||| || || || || |||||||| ||||
Sbjct 20657 ATATTTCGGTACCGCTTACCGAACCGCAGAAAGCTGGAATCGCATCTTTCTGTCCGTACA 20598
Query 25805 ACATTGGCCCGGGTAAGTGTTTCCCGTCGACGTTTTATAAACGAATTAATGCAGGAGATC 25864
|||| || ||||||||||| |||||||| ||||| ||||| || || ||||| || || |
Sbjct 20597 ACATCGGGCCGGGTAAGTGCTTCCCGTCAACGTTCTATAAGCGCATCAATGCCGGTGACC 20538
Query 25865 GAAAAGGTGCCTGCGAAGCGATTCGCTGGTGGATTAAGGACGGTGGCAGGGACTGCCG-- 25922
| || || ||||| || |||||||||||||||| |||| |||| | ||||||||
Sbjct 20537 GCCCCGGGGCATGCGAGGCAATTCGCTGGTGGATTAGAGACGCTGGCCGCGACTGCCGCC 20478
Query 25923 ----TATTCGCTCAAATAA---CTGTTATGGTCAGGTATCCCGTCGTGACCAGGAGAGCG 25975
|| || || || ||| || ||||||||| || || |||||||| || |
Sbjct 20477 TGACTAAAGGCCAGAAGAACGGCTGCTACGGTCAGGTAGAACGGCGAGACCAGGAAAGTG 20418
Query 25976 CGCTGGCGTGCTGGGGAATCGAC 25998
| ||||||||||||| || |||
Sbjct 20417 CTTTGGCGTGCTGGGGGATAGAC 20395
Score = 125 bits (138), Expect = 3e-24
Identities = 265/400 (66%), Gaps = 24/400 (6%)
Strand=Plus/Minus
Query 27077 AATCATTACCGTGATAACGCCATCGCCTACAAAGAGCAGCGCGATAAAGCCACAT----- 27131
|| || || || || ||||||||| ||||||||||||||||||||||||||||
Sbjct 18185 AACCACTATCGCGACAACGCCATCACCTACAAAGAGCAGCGCGATAAAGCCACTGAGAAA 18126
Query 27132 ----------------CCATCATCGATGATATGCAGAAGCGGCAACGTGATGTAGCAGAA 27175
||| |||| | || ||||||| || || ||||||| || |
Sbjct 18125 CTCAGCCAGGCCAACGCCACCATCAAAGACATGCAGACCCGCCAGCGTGATGCCGCTGCG 18066
Query 27176 CTTGACGCCAGATACACAAAGGAGCTTGCTGATGCTAATGCGACTATCGAAAGTCTCCGT 27235
|| || |||| |||||| || | |||||||| || | | || || |||| | |
Sbjct 18065 CTGGATGCCAAATACACTGGAGAACCGGCTGATGCGAAAGATATCATTGAGCGTCTGCAT 18006
Query 27236 GCTGATGTTTCTGCTGGTCGTAAGCGCCTGCAAGTCGCCGCCACCTGT---GCAAAGTCA 27292
||||| |||||| |||||||| ||||| || ||| | |||| || || |
Sbjct 18005 AGCGATGTCATTGCTGGCCGTAAGCGGCTGCAGCTCAACGCAAACTGTCCCGCGAACGGA 17946
Query 27293 ACGACCGGAGCCAGCAGCATGGGCGATGGAGAAAGCCCAGGACTTACAGCAGATGCTGAA 27352
||||||| || || |||||||||||| |||| ||||||| | ||||||
Sbjct 17945 GCGACCGGCACCGGCGGCATGGGCGATGCTTCCGGCCCCAGACTTACTGACTCCGCTGAA 17886
Query 27353 CTCAATTATTACCGTCTCAGAAGTGGAATCGACAAGATAACCGCGCAGGTTAACTACCTG 27412
| |||||| | ||||||| |||||| || | || |||||| ||| |||
Sbjct 17885 CGGGATTATTTCATCCTCAGAAAGCGAATCGTCACAGTGACGAAGCAGGTCGGCTATCTG 17826
Query 27413 CAGGAATACATCAGGACGCAATGCCTGAAATAAttttttt 27452
||| | ||||| || || || ||| | |||||| |||||
Sbjct 17825 CAGAACTACATAAGCACTCAGTGCTTAAAATAAAGTTTTT 17786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 200507615930440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |