Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_025452.1 Length=155346 Score E Sequences producing significant alignments: (Bits) Value seq974 170 2e-37 >seq974 Length=31311 Score = 170 bits (188), Expect = 2e-37 Identities = 250/354 (71%), Gaps = 0/354 (0%) Strand=Plus/Plus Query 26927 CCACGGTTGTTCTTCAGGACAACGACGTCATCGAACTGGTAGTGCCACAGAGGGATGTAC 26986 ||||||||||| |||||||| | | | || | | |||||||| |||| | || Sbjct 7 CCACGGTTGTTTTTCAGGACCAGCAGGCTTTCCACTTCCAGGTGCCACATAGGGTAGAAC 66 Query 26987 CCTGTCGCTGCACCGCCGCGAATGCCGCCCTGAGAGCACGACTTGAGCGCCCCAGTGAGA 27046 ||||| ||||||||||| | ||||||||||||||| || || | |||| || Sbjct 67 AGGGTCGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTTACCGCCGTCTGGAAG 126 Query 27047 TACTTGATGAACGGGATCAGGCCTGTATGAACCATCTCTCCGCCGCGAATAGGACTACCA 27106 | ||| ||||||||| ||| || || | || ||||||||||| || || || Sbjct 127 TGCTTATAGAACGGGATACAGCCGGTGTGGAATGCTTCACCGCCGCGAATCGGGCTGCCC 186 Query 27107 ATACCACGGATTGCCCCGAAGTCAAAACCGATACCAGCGCGTTTGGACACATAGTCAACG 27166 | ||||||| ||| || | |||||||| || || | ||| || || | ||| Sbjct 187 AGCGCACGGATGCGACCGGCGTTGATGCCGATACCGGCACGCTGGGAAACGTATTTCACG 246 Query 27167 ATGGTCTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCACCAGTCTTGATCAACACACAT 27226 |||| ||| ||| |||||||| || |||||| |||||||| || ||||| || || Sbjct 247 ATGGCGCTGGACGTGGCGTTGATGGAATCCAGGCTGTCACCACACTCGATCAGTACGCAG 306 Query 27227 GAGCTGAACTGACGGGTAGGAGTACGAACACCGGCCATGATCGGGGTTGGAAGA 27280 ||||||||||||||||| || || || || || | |||||| || || || ||| Sbjct 307 GAGCTGAACTGACGGGTTGGGGTGCGCACGCCAGACATGATTGGCGTAGGCAGA 360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496968055241440