Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_025471.1
Length=36844
Score E
Sequences producing significant alignments: (Bits) Value
seq997 95.1 3e-15
>seq997
Length=29618
Score = 95.1 bits (104), Expect = 3e-15
Identities = 337/513 (66%), Gaps = 38/513 (7%)
Strand=Plus/Minus
Query 795 CGGCACCATTATTTGCCGCTCAATGGACAACCCCGCCTCGATTGTTGGTTTCAAAATTTC 854
||| |||| || ||||| |||||||| || |||| ||||| || |||||||||||
Sbjct 14060 CGGGACCACAATCTGCCGTTCAATGGAGAAGCCCGGATCGATAGTCGGTTTCAAAATCGG 14001
Query 855 TAGGGCATTGGTAGATGAAATCGACGTTTTGCCGAAGAAG--AAAGCGCACGACGCATGG 912
|| || |||| ||||| | ||||| || || | || |||||||| | ||||||
Sbjct 14000 TAACGCGATGGTTGATGAGCTGGACGTCATGGCG--GCAGCCAAAGCGCAACAGGCATGG 13943
Query 913 AACAAGATTATTGCTCGGATGCGCTTGGTGATTGACGGCGTTGTG-AACGGTATCGGCGT 971
|| || || || || ||||| | | |||| || |||| | ||||| |||| ||
Sbjct 13942 CGAAAAATCATAGCCCGTATGCGTTACAAGGTTGATGG-GTTGCGTAACGGCATCGATGT 13884
Query 972 TACAACCACACCAGAGGGTTTCCGTTTCGTCTATGAGCGATTC---AAGG-AAAACCCGA 1027
|| || || ||||| || ||| |||||||| ||| ||| |||| | || ||
Sbjct 13883 CACCACAACGCCAGAAGGGTTCAAGTTCGTCTACCAGCAGTTCGTGAAGGCAGTACGGGA 13824
Query 1028 GCAAAGATTACT--CGA------------TGGTACAGGCCAGCACATACGAAAA--CGAA 1071
| | ||| ||| || | ||||||||||| | ||| || ||||
Sbjct 13823 GAAGCCCCAACTGGCGACCCTGTATGGACTGATTCAGGCCAGCACGTTCGACAATGCGAA 13764
Query 1072 GAATACCTACCGCCTGACTACATATCGTCACTTTACGACACATACCCAGATGCGCTGATT 1131
|| |||| |||||||| ||||| | || || | | || || |||| ||||||
Sbjct 13763 GA--ACCTTCCGCCTGATTACATCCCATCGCTGCTGAGCTCTTATCCTGATGAACTGATT 13706
Query 1132 GACGCCTACATTCGCGGCAAGTTTGTGAACATGACGAGCGGTAGCGTTTACACCAATTAC 1191
| ||||| | ||||| ||||| ||| | | ||||| | ||||| || | |
Sbjct 13705 CAGGCCTATCTGCGCGGGAAGTTCACCAACCTTAACAGCGGGACTATTTACCACACGTTC 13646
Query 1192 GACCG--CGCCGAGTGCAACAGT-CT--CGAGTCGTGGAATGGGGACGAGCCGATTCATT 1246
|||| || || | ||| || || ||| | ||||||| || | || ||
Sbjct 13645 AACCGTAAGCTGAAT--AACTGTGCTGATGAGGTTCAGGATGGGGATCCGCTG-TTTAT- 13590
Query 1247 GCGGCATGGACTTCAACGTGCGCAACATGGCCG 1279
||||||||||||||||||| | || |||||||
Sbjct 13589 -CGGCATGGACTTCAACGTGGGAAAAATGGCCG 13558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 117776690861368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |