Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_025471.1 Length=36844 Score E Sequences producing significant alignments: (Bits) Value seq997 95.1 3e-15 >seq997 Length=29618 Score = 95.1 bits (104), Expect = 3e-15 Identities = 337/513 (66%), Gaps = 38/513 (7%) Strand=Plus/Minus Query 795 CGGCACCATTATTTGCCGCTCAATGGACAACCCCGCCTCGATTGTTGGTTTCAAAATTTC 854 ||| |||| || ||||| |||||||| || |||| ||||| || ||||||||||| Sbjct 14060 CGGGACCACAATCTGCCGTTCAATGGAGAAGCCCGGATCGATAGTCGGTTTCAAAATCGG 14001 Query 855 TAGGGCATTGGTAGATGAAATCGACGTTTTGCCGAAGAAG--AAAGCGCACGACGCATGG 912 || || |||| ||||| | ||||| || || | || |||||||| | |||||| Sbjct 14000 TAACGCGATGGTTGATGAGCTGGACGTCATGGCG--GCAGCCAAAGCGCAACAGGCATGG 13943 Query 913 AACAAGATTATTGCTCGGATGCGCTTGGTGATTGACGGCGTTGTG-AACGGTATCGGCGT 971 || || || || || ||||| | | |||| || |||| | ||||| |||| || Sbjct 13942 CGAAAAATCATAGCCCGTATGCGTTACAAGGTTGATGG-GTTGCGTAACGGCATCGATGT 13884 Query 972 TACAACCACACCAGAGGGTTTCCGTTTCGTCTATGAGCGATTC---AAGG-AAAACCCGA 1027 || || || ||||| || ||| |||||||| ||| ||| |||| | || || Sbjct 13883 CACCACAACGCCAGAAGGGTTCAAGTTCGTCTACCAGCAGTTCGTGAAGGCAGTACGGGA 13824 Query 1028 GCAAAGATTACT--CGA------------TGGTACAGGCCAGCACATACGAAAA--CGAA 1071 | | ||| ||| || | ||||||||||| | ||| || |||| Sbjct 13823 GAAGCCCCAACTGGCGACCCTGTATGGACTGATTCAGGCCAGCACGTTCGACAATGCGAA 13764 Query 1072 GAATACCTACCGCCTGACTACATATCGTCACTTTACGACACATACCCAGATGCGCTGATT 1131 || |||| |||||||| ||||| | || || | | || || |||| |||||| Sbjct 13763 GA--ACCTTCCGCCTGATTACATCCCATCGCTGCTGAGCTCTTATCCTGATGAACTGATT 13706 Query 1132 GACGCCTACATTCGCGGCAAGTTTGTGAACATGACGAGCGGTAGCGTTTACACCAATTAC 1191 | ||||| | ||||| ||||| ||| | | ||||| | ||||| || | | Sbjct 13705 CAGGCCTATCTGCGCGGGAAGTTCACCAACCTTAACAGCGGGACTATTTACCACACGTTC 13646 Query 1192 GACCG--CGCCGAGTGCAACAGT-CT--CGAGTCGTGGAATGGGGACGAGCCGATTCATT 1246 |||| || || | ||| || || ||| | ||||||| || | || || Sbjct 13645 AACCGTAAGCTGAAT--AACTGTGCTGATGAGGTTCAGGATGGGGATCCGCTG-TTTAT- 13590 Query 1247 GCGGCATGGACTTCAACGTGCGCAACATGGCCG 1279 ||||||||||||||||||| | || ||||||| Sbjct 13589 -CGGCATGGACTTCAACGTGGGAAAAATGGCCG 13558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117776690861368