Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_025830.1
Length=120938
Score E
Sequences producing significant alignments: (Bits) Value
seq236 188 6e-43
seq637 136 3e-27
>seq236
Length=545527
Score = 188 bits (208), Expect = 6e-43
Identities = 153/184 (83%), Gaps = 1/184 (1%)
Strand=Plus/Plus
Query 109107 GTGGTCAACATCTGAACGTTAACGTTCTGCGTCGGGAAACTCTGGAAGATGCAGTTAAGC 109166
||||||| || || ||||| ||||| ||||| || ||||| ||| || || ||| |||
Sbjct 30717 GTGGTCAGCACCTTAACGTAAACGTACTGCGCCGCGAAACGCTGATGGACGCGGTTGAGC 30776
Query 109167 ATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAACT 109226
| || |||||||| |||||||||||||| || || || |||||||| || ||||| ||||
Sbjct 30777 ACCCAGAAAAATACCCGCAGCTGACCATTCGCGTGTCTGGTTATGCGGTACGCTTCAACT 30836
Query 109227 CTCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGTACCTTTACTGAGAGTCTATAAT 109286
||||||| || ||||||||||||||||||||||| |||||||||||||| || || |||
Sbjct 30837 CTCTGACCCCAGAACAGCAGCGCGACGTTATCGCGCGTACCTTTACTGAAAGCCTGTAA- 30895
Query 109287 GGCT 109290
||||
Sbjct 30896 GGCT 30899
>seq637
Length=122170
Score = 136 bits (150), Expect = 3e-27
Identities = 132/170 (78%), Gaps = 0/170 (0%)
Strand=Plus/Minus
Query 109107 GTGGTCAACATCTGAACGTTAACGTTCTGCGTCGGGAAACTCTGGAAGATGCAGTTAAGC 109166
||||||| || |||||||| ||||| || || |||| ||| ||||| | | |
Sbjct 107284 GTGGTCAGCACCTGAACGTGAACGTAATGAACCGTGAAATGCTGCTCGATGCGATGGAAC 107225
Query 109167 ATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAACT 109226
|||| || |||||||| |||||||||||||||||||| || || ||||| || |||||||
Sbjct 107224 ATCCTGAGAAATATCCTCAGCTGACCATCCGTGTATCTGGCTACGCAGTACGTTTTAACT 107165
Query 109227 CTCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGTACCTTTACTGAG 109276
| |||||| |||||||||| ||||||||| | ||||| || ||| ||
Sbjct 107164 CCCTGACTAAAGAACAGCAGCAGGACGTTATCACCCGTACTTTCACTCAG 107115
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 386868341180566
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |