Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_025830.1 Length=120938 Score E Sequences producing significant alignments: (Bits) Value seq236 188 6e-43 seq637 136 3e-27 >seq236 Length=545527 Score = 188 bits (208), Expect = 6e-43 Identities = 153/184 (83%), Gaps = 1/184 (1%) Strand=Plus/Plus Query 109107 GTGGTCAACATCTGAACGTTAACGTTCTGCGTCGGGAAACTCTGGAAGATGCAGTTAAGC 109166 ||||||| || || ||||| ||||| ||||| || ||||| ||| || || ||| ||| Sbjct 30717 GTGGTCAGCACCTTAACGTAAACGTACTGCGCCGCGAAACGCTGATGGACGCGGTTGAGC 30776 Query 109167 ATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAACT 109226 | || |||||||| |||||||||||||| || || || |||||||| || ||||| |||| Sbjct 30777 ACCCAGAAAAATACCCGCAGCTGACCATTCGCGTGTCTGGTTATGCGGTACGCTTCAACT 30836 Query 109227 CTCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGTACCTTTACTGAGAGTCTATAAT 109286 ||||||| || ||||||||||||||||||||||| |||||||||||||| || || ||| Sbjct 30837 CTCTGACCCCAGAACAGCAGCGCGACGTTATCGCGCGTACCTTTACTGAAAGCCTGTAA- 30895 Query 109287 GGCT 109290 |||| Sbjct 30896 GGCT 30899 >seq637 Length=122170 Score = 136 bits (150), Expect = 3e-27 Identities = 132/170 (78%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 109107 GTGGTCAACATCTGAACGTTAACGTTCTGCGTCGGGAAACTCTGGAAGATGCAGTTAAGC 109166 ||||||| || |||||||| ||||| || || |||| ||| ||||| | | | Sbjct 107284 GTGGTCAGCACCTGAACGTGAACGTAATGAACCGTGAAATGCTGCTCGATGCGATGGAAC 107225 Query 109167 ATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAACT 109226 |||| || |||||||| |||||||||||||||||||| || || ||||| || ||||||| Sbjct 107224 ATCCTGAGAAATATCCTCAGCTGACCATCCGTGTATCTGGCTACGCAGTACGTTTTAACT 107165 Query 109227 CTCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGTACCTTTACTGAG 109276 | |||||| |||||||||| ||||||||| | ||||| || ||| || Sbjct 107164 CCCTGACTAAAGAACAGCAGCAGGACGTTATCACCCGTACTTTCACTCAG 107115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 386868341180566