Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_026010.1 Length=50109 Score E Sequences producing significant alignments: (Bits) Value seq997 107 6e-19 >seq997 Length=29618 Score = 107 bits (118), Expect = 6e-19 Identities = 206/301 (68%), Gaps = 2/301 (1%) Strand=Plus/Plus Query 23311 CCGCCGAACGAGTCCTTGATTTGACCGCCTTGCTGGATGGCAACCATCCAAACTGGCATA 23370 ||||| ||||| || | || ||||| ||||| ||||| ||||| |||| |||||| Sbjct 4442 CCGCCAAACGAATCGCGCAGCTGGCCGCCCTGCTGAATGGCCACCATATAAACCGGCATA 4501 Query 23371 CCGGACGCAAGAGATGTAACGACGTCGGTAATCTGTGCAGGAAGCATTCGCATTGCCTGC 23430 |||||||| || || || || | |||||| || || || || ||||| || | Sbjct 4502 CCGGACGCCAGTGAGGTCACAATGTCGGTCATTTGCATCGGGAGATAACGCATCGCGTTG 4561 Query 23431 CTATATTGCCCTGCGCTAATACCTGCGGCATTCATGGCTCGACCCTGTTCTTTCAGTTTT 23490 | |||||||| ||||| || || | | ||| ||| |||| ||||||||| Sbjct 4562 CGGTATTGCCCCGCGCTGATCGCTCCTGACTTCCACGCTTCCTCCTGCTCTTTCAGTCGG 4621 Query 23491 GCGATCAGGGGCGCTGCTTCATTTGATAGTCCAAGCTGAGCCGCTTTCAGTTCCATTAAC 23550 ||||||| || || || || || | ||||| || || ||||| || || | | Sbjct 4622 GCGATCATCGGTGCAGCACGATCGGACACGCCAAGTTGGGCTGCTTTTAGCTCTAACAGT 4681 Query 23551 TCTGCGTGAGTTTTGCCAATGGCGTTAACCTGACTATT-CAGGGAATCCATGAACGCTTT 23609 |||||| | ||||| || || || | ||||| || || ||| ||||| || || | ||| Sbjct 4682 TCTGCGCGCGTTTTTCCGATTGCTGTGACCTG-CTCTTCCAGCGAATCGATAAAGGTTTT 4740 Query 23610 G 23610 | Sbjct 4741 G 4741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160223786559788