Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq13 104 7e-19
seq750 100 9e-18
seq644 100 9e-18
seq9 100 9e-18
seq447 98.7 3e-17
seq382 98.7 3e-17
>seq13
Length=2074850
Score = 104 bits (114), Expect = 7e-19
Identities = 76/88 (86%), Gaps = 3/88 (3%)
Strand=Plus/Minus
Query 2753 TTGTACTGTGTTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAA 2812
||||||| || || || ||| |||||||||||||||||| ||||||||||||||||||
Sbjct 731342 TTGTACT---TTCATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAA 731286
Query 2813 GGTCCCTGGTTCAACCCCGGGCTTCAGC 2840
|||||| ||||||| |||||| ||| ||
Sbjct 731285 GGTCCCCGGTTCAATCCCGGGTTTCGGC 731258
Score = 100 bits (110), Expect = 9e-18
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825
|| || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct 727980 ATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCA 727921
Query 2826 ACCCCGGGCTTCAGC 2840
| |||||| ||| ||
Sbjct 727920 ATCCCGGGTTTCGGC 727906
Score = 100 bits (110), Expect = 9e-18
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825
|| || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct 732179 ATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCA 732120
Query 2826 ACCCCGGGCTTCAGC 2840
| |||||| ||| ||
Sbjct 732119 ATCCCGGGTTTCGGC 732105
>seq750
Length=73972
Score = 100 bits (110), Expect = 9e-18
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 44989 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAAT 44930
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 44929 CCCGGGTTTCGGC 44917
>seq644
Length=119464
Score = 100 bits (110), Expect = 9e-18
Identities = 67/75 (89%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825
|| || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct 75753 ATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCA 75694
Query 2826 ACCCCGGGCTTCAGC 2840
| |||||| ||| ||
Sbjct 75693 ATCCCGGGTTTCGGC 75679
>seq9
Length=2311385
Score = 100 bits (110), Expect = 9e-18
Identities = 66/73 (90%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827
||| ||| |||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 56784 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAAT 56843
Query 2828 CCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 56844 CCCGGGTTTCGGC 56856
>seq447
Length=257201
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| |
Sbjct 185760 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 185701
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 185700 CCGGGTTTCGGC 185689
>seq382
Length=321670
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 160521 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 160580
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 160581 CCGGGTTTCGGC 160592
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15849289001130
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |