Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq13 104 7e-19 seq750 100 9e-18 seq644 100 9e-18 seq9 100 9e-18 seq447 98.7 3e-17 seq382 98.7 3e-17 >seq13 Length=2074850 Score = 104 bits (114), Expect = 7e-19 Identities = 76/88 (86%), Gaps = 3/88 (3%) Strand=Plus/Minus Query 2753 TTGTACTGTGTTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAA 2812 ||||||| || || || ||| |||||||||||||||||| |||||||||||||||||| Sbjct 731342 TTGTACT---TTCATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAA 731286 Query 2813 GGTCCCTGGTTCAACCCCGGGCTTCAGC 2840 |||||| ||||||| |||||| ||| || Sbjct 731285 GGTCCCCGGTTCAATCCCGGGTTTCGGC 731258 Score = 100 bits (110), Expect = 9e-18 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| |||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 727980 ATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCA 727921 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 727920 ATCCCGGGTTTCGGC 727906 Score = 100 bits (110), Expect = 9e-18 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| |||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 732179 ATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCA 732120 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 732119 ATCCCGGGTTTCGGC 732105 >seq750 Length=73972 Score = 100 bits (110), Expect = 9e-18 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 44989 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAAT 44930 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 44929 CCCGGGTTTCGGC 44917 >seq644 Length=119464 Score = 100 bits (110), Expect = 9e-18 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| |||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct 75753 ATCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCA 75694 Query 2826 ACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 75693 ATCCCGGGTTTCGGC 75679 >seq9 Length=2311385 Score = 100 bits (110), Expect = 9e-18 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 56784 GGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAAT 56843 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 56844 CCCGGGTTTCGGC 56856 >seq447 Length=257201 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||| ||||||| | Sbjct 185760 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCCGGTTCAATC 185701 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 185700 CCGGGTTTCGGC 185689 >seq382 Length=321670 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 160521 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 160580 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 160581 CCGGGTTTCGGC 160592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15849289001130