Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq486 179 3e-40
seq119 91.5 1e-13
>seq486
Length=217039
Score = 179 bits (198), Expect = 3e-40
Identities = 719/1103 (65%), Gaps = 42/1103 (4%)
Strand=Plus/Plus
Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698
|| |||||||| |||| ||| | ||||| ||||| | | ||| ||||| || |||||
Sbjct 174762 ACAGTGAATTGTATTGCATTTACAGCAGGCTTAGTACGTAAATAATACATTCCAGTCTTC 174821
Query 136699 AAACCCTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGGCC 136758
|| ||| | | ||| | ||| ||| || |||| ||| || |||| | || || ||
Sbjct 174822 AAGCCCATTTTCCACGCATAGAAATGAATCGATGTCAATTTTCCATAGTTTGGTTCTGCT 174881
Query 136759 ACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGTTC 136818
|| | || | ||||| ||||| || ||| ||| || || || |||||||| ||
Sbjct 174882 ACATGGATGTTAAATGATTGACTCTGGTCAATGAAAGCACCACGATCCGCGGCCAT-TTG 174940
Query 136819 AATAGTACTTTTTGCTTA-ATTTCCCAAGCGGTTTT--AAAGAGCTCCT-TGACATTGGG 136874
|| || | || | | || ||||| | || || ||||| ||| | | | |||||
Sbjct 174941 GATTGTGGTCTTCACAGATATCTCCCACACAGTCTTGTAAAGATCTCTTATTTCTTTGGG 175000
Query 136875 CGGAATTTCATCGATATTCTGTACAGATCCGTTGTTTT---TGATGATTTTCATCATGAG 136931
| ||||| ||| ||| | ||||| ||||| | | |||| || ||||
Sbjct 175001 AATACTTTCA---ATAGACTGAATGGATCCATTGTTGTGTATAATGAGATTTTTCATATC 175057
Query 136932 ATCAGTCGAGTATACGTTGCTCTCTATGAGTTTATCGACG-AGATGCTGATTTACTACTT 136990
|||| | | | | || ||| |||| | ||| | || || || || || || |
Sbjct 175058 ATCATCCCATAAATCA--GC-CTCGGTGAGATCG-CGAAGCAGGTGATGGTTGACCACCT 175113
Query 136991 GATATTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGATT 137050
| |||| || || || ||||| | | ||| | || |||||| ||||| || ||||
Sbjct 175114 GGAATTCTCCAGAAAGAACTCTTCTTTGGTAAATGTTTGAAGTGAATGGCTCAAATGATT 175173
Query 137051 CGTTGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCATGTAAGCGATCAACAATGAAT 137110
| ||||| || | |||||||||||| | || || |||||| || | ||||| || |
Sbjct 175174 CATTGTTGCCAAGAATCTGTGCAGTGGAGGCGGTGGGCATGGGGGCCAGCAACAGAGAGT 175233
Query 137111 TCCGTAAACCGTGTACGGCCAATTGTTGCTTGAGCTCTTTCCAGTTCCACAGATTGTTCG 137170
|||| | || ||| || | | ||||| || | |||||| |||||| || |
Sbjct 175234 TCCGCAGGCCATGTTTCGCGATCTTCTGCTTCAGAGCACTCCAGTCCCACAG---GTCTG 175290
Query 137171 ATTGGGTTATATTCCACAAAT--CAAACTGCAAAAGTCCGCGACTTGCAGGACTTTCTGC 137228
||||| |||| || || || | ||||| | ||| ||| || |||| | ||
Sbjct 175291 --TGGGTGTCTTTCCCCACATTTCATATTGCAATATTCCTTCACTGGCCGGACAACCAGC 175348
Query 137229 ATAAGAATCATATGTTCCGTGCAGTTTCGCCAGTTCAATACTCTGGACTAGTGCGCCATA 137288
||| | ||||| ||| | || ||||||||| || ||| || |||||
Sbjct 175349 ATACGTTTCATAAACGCCGAGTTTTTCGGCCAGTTCACAGCTAGCTTCTAAAGCCCCATA 175408
Query 137289 GTAAATAGTTTCGGAGATTTTTCTATTCAATTCTCTAG-CTTCTTGGCTGTCGTAGGGCA 137347
|| || ||||| | |||| | ||| | | ||| | || ||| || ||||| || |
Sbjct 175409 ATAGATGGTTTCAAATATTTGTTGATTGAGCT-TCTGGGCTCCTTCACTCTCGTAAGGAA 175467
Query 137348 T----ATCCAATATAGCGAAAGCATCTGCAAGTCCTTGAATACCGATACCGATAGGTCTG 137403
||| |||| | |||||||| || || ||||| | || || |||||||||| |
Sbjct 175468 GGCGCATC-AATACA---AAAGCATCGGCCAGACCTTGGACGCCAATGCCGATAGGTCGG 175523
Query 137404 TGTTTAAAATTTGATATTTGAGCG-CTAACAAGCGGATAAAAGTTTGCGTCTATAATTCT 137462
|| | | || || ||| || || | | ||||| | || | || ||||| |
Sbjct 175524 TGCCTCATGTTAGACTTTTTCGCTTCTGGGACG-GGATAGTAATTAACATCGATAATCTT 175582
Query 137463 ATTGAGATTGTTAGTAACGACTCTGGACACTTTGTAGAGCAATTCGAAATCGAAGCTTTT 137522
|| || || | ||| | || | ||| ||||| | || || ||||| | ||||
Sbjct 175583 GTTCAGGTTCTCAGTTATGATTTTGGTCACTTGTTTTAGTTTCTCAAAATCATATGTTTT 175642
Query 137523 AGACTGTTTGTTAGCAAAATTATTGACGGCAATAGAGGCTAAGTTGCATACGGCCGTTTC 137582
| | | |||| |||| | ||||| ||||| || || |||||||| || || |||
Sbjct 175643 AT--TTTCGGTTA-CAAACATGTTGACAGCAATTGACGCCAAGTTGCAAACAGCTACTTC 175699
Query 137583 TGTATTGTCGCTGTATTGTACAATTTCGGCGCAAAGATTGCTGTTTCGGATCACTCCCAA 137642
| |||| | ||||| || | ||| ||||||||| | ||| ||||||
Sbjct 175700 ATCAGCAGATGTGTACTCAACAATCTCCGTGCATAGATTGCTGCATTTGATGGTTCCCAA 175759
Query 137643 ATTCTTTTGATTG-TTTTTCTCGTTGACGTG-ATCTTTATATATCATATACGGAGTTCCG 137700
||||||||||||| | ||||| |||| | || |||||| || | ||| || ||||||||
Sbjct 175760 ATTCTTTTGATTGCTCTTTCT-GTTG-CATGCATCTTTGTAAAGCATGTATGGAGTTCCA 175817
Query 137701 GTTTCGACTTGAGTCTCAACAAT 137723
|| || ||||| | ||||| |||
Sbjct 175818 GTCTCTACTTGTGCCTCAATAAT 175840
>seq119
Length=877449
Score = 91.5 bits (100), Expect = 1e-13
Identities = 102/134 (76%), Gaps = 2/134 (1%)
Strand=Plus/Plus
Query 105770 GCACGGCTTTCATGTACACGAATTCGGCGACACGAGCAACGGTTGCACGTCTGCCGGCGA 105829
||||||||| || | ||||| ||||| |||| | |||||| ||||| || |||||||
Sbjct 424266 GCACGGCTTCCACATCCACGAGTTCGGGGACAACACCAACGGCTGCACCTCCGCCGGCGC 424325
Query 105830 GCATTTCAACCCTACGG-GCATGGCTCACGGCGCGCCCAGCTCTGCCGTTCGTCACGTCG 105888
||| |||||||| | ||| | | ||||||||||||||| ||||| || || ||||
Sbjct 424326 GCACTTCAACCCGCTGCAGCA-GACGCACGGCGCGCCCAGCGACGCCGTCCGCCATGTCG 424384
Query 105889 GTGATCTTGGCAAT 105902
| || | ||||||
Sbjct 424385 GGGACTTGGGCAAT 424398
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445084418758080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |