Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq170 98.7 1e-15
seq117 98.7 1e-15
>seq170
Length=689707
Score = 98.7 bits (108), Expect = 1e-15
Identities = 123/166 (74%), Gaps = 2/166 (1%)
Strand=Plus/Minus
Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041
|| ||| || || | || || | ||| | ||||||||| | ||||||||||||||||||
Sbjct 654330 CTCAAGTCCAGTAATATGTGCTATCATATGGGTGAGCAGAGCGTAGCTGGCTATGTTGAA 654271
Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101
|| || |||||||||||||| | || ||||||||| | || ||||||| ||
Sbjct 654270 TGGCACACCCAGGCCCATGTCTGCACTCCGCTGGTACAGTAGACAGGAGAGCTTGCCACT 654211
Query 147102 GGCCACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCAT 147146
|||||||| ||||| ||| ||| || || || |||| |||||
Sbjct 654210 GGCCACGTGGAACTGCGCA-AGGCAATGACATGGTGGCAATGCCAT 654166
>seq117
Length=882221
Score = 98.7 bits (108), Expect = 1e-15
Identities = 123/166 (74%), Gaps = 2/166 (1%)
Strand=Plus/Plus
Query 146982 CTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAA 147041
|| ||| || || | || || | ||| | ||||||||| | ||||||||||||||||||
Sbjct 413030 CTCAAGTCCAGTAATATGTGCTATCATATGGGTGAGCAGAGCGTAGCTGGCTATGTTGAA 413089
Query 147042 GGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTC 147101
|| || |||||||||||||| | || ||||||||| | || ||||||| ||
Sbjct 413090 TGGCACACCCAGGCCCATGTCTGCACTCCGCTGGTACAGTAGACAGGAGAGCTTGCCACT 413149
Query 147102 GGCCACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCAT 147146
|||||||| ||||| ||| ||| || || || |||| |||||
Sbjct 413150 GGCCACGTGGAACTGTGCA-AGGCAATGACATGGTGGCAATGCCAT 413194
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583474915281600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |