Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq666 143 4e-28
seq486 129 8e-24
seq216 122 1e-21
seq215 122 1e-21
seq203 109 8e-18
seq236 96.9 5e-14
seq65 95.1 2e-13
>seq666
Length=109244
Score = 143 bits (158), Expect = 4e-28
Identities = 189/261 (72%), Gaps = 6/261 (2%)
Strand=Plus/Plus
Query 333080 TTGATGATCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACG 333139
||||| | |||||||||||||| | |||||| |||| || |||||||| |||||||||
Sbjct 36246 TTGATCTTGTTGCGCACGACGTCGATGCCGCGGTCGTTGGAGGCGTTGAGCTCGAGCACG 36305
Query 333140 GCCTCGTCGGCGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTG 333199
|| ||| | || || || | ||| |||||||||||||| ||| | |||||||||
Sbjct 36306 GCGTCGCGGAAGGAGGCCCCTAGCAGGGCGCGCGCCAGGCACAGGATCGTGGTGGTCTTG 36365
Query 333200 CCCGTGCCGGGCGGACCCGCCAGCAAGAGGTTGGGCATGTTGCC---GTCGGCGGCCAGC 333256
||| ||| ||||| ||||| | | | ||||||| |||||| | |||| ||
Sbjct 36366 CCCACGCCCGGCGGGCCCGCGATGATCACGTTGGGCGCGTTGCCCGACTTGGCGAACACG 36425
Query 333257 GCCTTGAGGTAGGCAACGGCGTGCTCGTTGCCGACAATGTCGTCGAGCACCATTGGGCGG 333316
||| || | || | || ||||||||| || |||||| || | | || |||
Sbjct 36426 GCC---AGCCGCGACACCGTGTCCTCGTTGCCCACGATGTCGCTGAACGTCTGCGGCCGG 36482
Query 333317 TACTTTTCGATCCATGGGAGG 333337
||||| |||||||||||||||
Sbjct 36483 TACTTCTCGATCCATGGGAGG 36503
>seq486
Length=217039
Score = 129 bits (142), Expect = 8e-24
Identities = 176/246 (72%), Gaps = 0/246 (0%)
Strand=Plus/Minus
Query 259940 GCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCG 259999
|||| ||| || ||||| ||| || || || || || | | |||||||| |||
Sbjct 176395 GCCGCCACCCCCCGCCCTCAGCTCTCCTCATGTTTCCTCATCGCCATGAAGGACGACAGC 176336
Query 260000 ATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGC 260059
||||| || ||||| ||||| || |||||||| || | || ||||| | || ||||||
Sbjct 176335 ATCGAAGGTATCTACGACACTCTGAAGCAGTGTGCATTAATATCCAAATCCGCGGGCGGC 176276
Query 260060 ATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGC 260119
|| || || | || | | || ||| ||||| | |||||||| ||||||
Sbjct 176275 ATAGGAGTTCATGTTCATTGCATCAGAGCGAAAGGCACCTACATCGCGGGCACGAACGGC 176216
Query 260120 CAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGAC 260179
|||||||| || ||||||||||| ||||| | ||| |||||||||||||||| |||
Sbjct 176215 GTCTCCAACGGGCTGGTGCCCATGCTGCGCGTGTACAACAACACGGCGCGCTACGTGGAC 176156
Query 260180 CAGTGC 260185
||| ||
Sbjct 176155 CAGGGC 176150
>seq216
Length=582351
Score = 122 bits (134), Expect = 1e-21
Identities = 167/232 (72%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||||||||||| | |||||||| |||||| |||| | ||| ||| ||| ||
Sbjct 33492 ATCTACAAGGTGTTGAAGCAGGTCCACCCCGACACCGGT-----ATC-TCCTCGAAGGCC 33545
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| |||||||||||||| || |||||||| |||| || |||| | | || || |
Sbjct 33546 ATGTCAATCATGAACTCGTTCGTGAACGACATCTTCGAGCGTATCGCCGCGGAAGCGTCT 33605
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| || || | || ||||||||| |||||| | | | ||| | |||||| |||||
Sbjct 33606 CGTCTCGCCCACTACAACAAGCGTTCGACGATCACCTCCAGGGAGGTGCAGACCTCCGTG 33665
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
| || | ||| ||| || || |||| |||||||||| || || ||||
Sbjct 33666 AGGCTCCTGCTGCCCGGTGAGCTCGCCAAGCACGCCGTCAGTGAAGGTACCA 33717
Score = 122 bits (134), Expect = 1e-21
Identities = 167/232 (72%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||||||||||| | |||||||| |||||| |||| | ||| ||| ||| ||
Sbjct 48037 ATCTACAAGGTGTTGAAGCAGGTCCACCCCGACACCGGT-----ATC-TCCTCGAAGGCC 48090
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| |||||||||||||| || |||||||| |||| || |||| | | || || |
Sbjct 48091 ATGTCAATCATGAACTCGTTCGTGAACGACATCTTCGAGCGTATCGCCGCGGAAGCGTCT 48150
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| || || | || ||||||||| |||||| | | | ||| | |||||| |||||
Sbjct 48151 CGTCTCGCCCACTACAACAAGCGTTCGACGATCACCTCCAGGGAGGTGCAGACCTCCGTG 48210
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
| || | ||| ||| || || |||| |||||||||| || || ||||
Sbjct 48211 AGGCTCCTGCTGCCCGGTGAGCTCGCCAAGCACGCCGTCAGTGAAGGTACCA 48262
>seq215
Length=584702
Score = 122 bits (134), Expect = 1e-21
Identities = 167/232 (72%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||||||||||| | |||||||| |||||| |||| | ||| ||| ||| ||
Sbjct 546663 ATCTACAAGGTGTTGAAGCAGGTCCACCCCGACACCGGT-----ATC-TCCTCGAAGGCC 546716
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| |||||||||||||| || |||||||| |||| || |||| | | || || |
Sbjct 546717 ATGTCAATCATGAACTCGTTCGTGAACGACATCTTCGAGCGTATCGCCGCGGAAGCGTCT 546776
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| || || | || ||||||||| |||||| | | | ||| | |||||| |||||
Sbjct 546777 CGTCTCGCCCACTACAACAAGCGTTCGACGATCACCTCCAGGGAGGTGCAGACCTCCGTG 546836
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
| || | ||| ||| || || |||| |||||||||| || || ||||
Sbjct 546837 AGGCTCCTGCTGCCCGGTGAGCTCGCCAAGCACGCCGTCAGTGAAGGTACCA 546888
Score = 122 bits (134), Expect = 1e-21
Identities = 167/232 (72%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||||||||||| | |||||||| |||||| |||| | ||| ||| ||| ||
Sbjct 556157 ATCTACAAGGTGTTGAAGCAGGTCCACCCCGACACCGGT-----ATC-TCCTCGAAGGCC 556210
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
||||| |||||||||||||| || |||||||| |||| || |||| | | || || |
Sbjct 556211 ATGTCAATCATGAACTCGTTCGTGAACGACATCTTCGAGCGTATCGCCGCGGAAGCGTCT 556270
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
|| || || | || ||||||||| |||||| | | | ||| | |||||| |||||
Sbjct 556271 CGTCTCGCCCACTACAACAAGCGTTCGACGATCACCTCCAGGGAGGTGCAGACCTCCGTG 556330
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
| || | ||| ||| || || |||| |||||||||| || || ||||
Sbjct 556331 AGGCTCCTGCTGCCCGGTGAGCTCGCCAAGCACGCCGTCAGTGAAGGTACCA 556382
>seq203
Length=607560
Score = 109 bits (120), Expect = 8e-18
Identities = 108/140 (77%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 333080 TTGATGATCTTGCGCACGACGTCCACGCCGCGCTCGTCCGACGCGTTGAGTTCGAGCACG 333139
||||| | |||||||||||||| | |||||| |||| || |||||||| |||||||||
Sbjct 83124 TTGATCTTGTTGCGCACGACGTCGATGCCGCGGTCGTTGGAGGCGTTGAGCTCGAGCACG 83065
Query 333140 GCCTCGTCGGCGGCCGCACCCAAGAGGACGCGCGCCAGGCACGCGATGCTCGTGGTCTTG 333199
|| ||| | || || || | || |||||||||||||| ||| | |||||||||
Sbjct 83064 GCGTCGCGGAAGGAGGCCCCTAGCAGCGCGCGCGCCAGGCACAGGATCGTGGTGGTCTTG 83005
Query 333200 CCCGTGCCGGGCGGACCCGC 333219
||| ||| ||||| |||||
Sbjct 83004 CCCACGCCCGGCGGGCCCGC 82985
>seq236
Length=545527
Score = 96.9 bits (106), Expect = 5e-14
Identities = 121/165 (73%), Gaps = 1/165 (1%)
Strand=Plus/Plus
Query 165747 TTGGCAGACCTGGTCACGTGGGGCGCCGTCGGTGCGCGCACCACCGAGAGCCAGGTGCAC 165806
||||| || ||| ||| ||| ||| | || ||||| ||||| || || |||
Sbjct 5382 TTGGC-GATCTGTTCAGCTGGTCCGCGATTGGCGCGCGTACCACGGAATCGCAAACCCAC 5440
Query 165807 CGCGAGATGGCGTCGGCGCTGCCGCTGCCCATTGGCTTCAAAAACAGCACCGACGGCAGC 165866
|||||||||||||| | ||| || |||| |||| || |||||| | ||||| ||||||
Sbjct 5441 CGCGAGATGGCGTCTGGCCTGTCGATGCCGGTTGGTTTTAAAAACGGTACCGATGGCAGC 5500
Query 165867 GTGGCGACGGCCCTCGATGCCGTGCGCACTGCCGCCCAGCCACAC 165911
|||||||||| || | ||| ||||| | || |||| ||| |||
Sbjct 5501 CTGGCGACGGCGATCAACGCCATGCGCGCGGCTGCCCTGCCGCAC 5545
>seq65
Length=1244346
Score = 95.1 bits (104), Expect = 2e-13
Identities = 131/178 (74%), Gaps = 4/178 (2%)
Strand=Plus/Plus
Query 1456122 GAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAG 1456181
||| ||||| |||||||||||| |||||||| || | | | || | ||| || | ||
Sbjct 631508 GAAGAAGGCTGACTGGGCGATGCAGTGGATCGGCA-GCAAGACCGCAACA-TTCGGTGAA 631565
Query 1456182 CGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATC 1456240
| | || | || || || || ||||||||||| ||||| ||||||||| |||||
Sbjct 631566 AGAATAGTAGCATTCGCGGCAGTTGAGGGCATCTTCTTCTCTGGCAGTTTCGCATCCATC 631625
Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATC 1456298
|| ||||| || ||| | || ||||||||||| | | ||| ||||| ||||| |||
Sbjct 631626 TTCTGGCTTAAAAAGAGAGGGCTCATGCCCGGAC-TGACCTTCAGCAATGAATTGATC 631682
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177638165402628
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