Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_027340.1
Length=162160
Score E
Sequences producing significant alignments: (Bits) Value
seq974 172 6e-38
>seq974
Length=31311
Score = 172 bits (190), Expect = 6e-38
Identities = 261/364 (72%), Gaps = 8/364 (2%)
Strand=Plus/Plus
Query 58398 TCAATACCACGGTTGTTCTTCAGCACGATCATGTCATCGAACTGGAAGTGCCACATCGGG 58457
|||| |||||||||||| ||||| || | || | || | | | ||||||||| |||
Sbjct 1 TCAACACCACGGTTGTTTTTCAGGACCAGCAGGCTTTCCACTTCCAGGTGCCACATAGGG 60
Query 58458 TAATACATGGTTGCTGAGCCGCCACGGATACCACCCTGAGAACAGCTCTTCAGATCACCA 58517
|| ||| ||| || | ||||| || | || |||||||| ||| || | | ||
Sbjct 61 TAGAACAGGGTCGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTTAC--CGCCG 118
Query 58518 AC--GAACTTCTTGATGAACGGGATCGTACCGGTATG-AGTCATCTCACCGTCGCGGATA 58574
| ||| | ||| ||||||||| ||||| || | | | |||||| |||| ||
Sbjct 119 TCTGGAAGTGCTTATAGAACGGGATACAGCCGGTGTGGAATGCT-TCACCGCCGCGAATC 177
Query 58575 GAGGAACCCAGGGCACGGATAGCG-CCGAAGTCAACACCGATACCAGCACGCTTAGACAC 58633
| | ||||| |||||||| ||| ||| || | |||||||| ||||||| || ||
Sbjct 178 GGGCTGCCCAGCGCACGGAT-GCGACCGGCGTTGATGCCGATACCGGCACGCTGGGAAAC 236
Query 58634 GTATTTCACGATTGCGGTGCCAGTAGCAGTAATGCTGTCCAGGGTGTCACCAGACTTGAT 58693
|||||||||||| ||| || || || | ||| |||||| |||||||| ||| |||
Sbjct 237 GTATTTCACGATGGCGCTGGACGTGGCGTTGATGGAATCCAGGCTGTCACCACACTCGAT 296
Query 58694 CAGGACACATGAGCTGAACTGACGGGTACGGGTACGCACGCCTGCCATGATAGGTGTTGG 58753
||| || || ||||||||||||||||| |||| |||||||| | |||||| || || ||
Sbjct 297 CAGTACGCAGGAGCTGAACTGACGGGTTGGGGTGCGCACGCCAGACATGATTGGCGTAGG 356
Query 58754 GAGA 58757
|||
Sbjct 357 CAGA 360
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 518772366268800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |