Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_027341.1
Length=130008
Score E
Sequences producing significant alignments: (Bits) Value
seq1512 210 2e-49
>seq1512
Length=4801
Score = 210 bits (232), Expect = 2e-49
Identities = 364/520 (70%), Gaps = 43/520 (8%)
Strand=Plus/Plus
Query 27237 CAATTAAAAGCAGaaatcaataaaaaa-tatcacttaatgcttgataaaaa-aataatat 27294
|||||||||| |||||| ||||||||| ||||| |||| |||| || | ||| | ||
Sbjct 110 CAATTAAAAGTAGAAATAAATAAAAAAATATCATCTAATATTTGACAACGATAATTA-AT 168
Query 27295 tttgatataataatatatatagaaataaaGGAGAACTAACACATGGTAGTTAAATTAACA 27354
|||| ||||||| |||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 169 TTTGGTATAATAGTATATATAGAAATAAAGGAGAACTAACAAATGGTAGTCAAATTAACG 228
Query 27355 CAAAAACAAGCTGATTATCTTAAAACTTTTGGAA-----------GACa-----aaaaaa 27398
||||||||||||||||||||| |||||||||||| || | ||||||
Sbjct 229 CAAAAACAAGCTGATTATCTTGAAACTTTTGGAAACCTTGAAGATGAAATAAACAAAAAA 288
Query 27399 CTTG-GCTTTCTATTATATTTCTCGTTGGGGTTGGGATTGTCTTCTTAAAGATGGTACag 27457
| | |||| | | | || |||||| |||| ||| ||| | |
Sbjct 289 CGAGCGCTT--TGTCACATCACTCGTT----TTGG----------TTATGGATACAATTG 332
Query 27458 aaaaaacttacaaagataacgaagaaaaaccatttaatcttgatgaaaaagaaaaaatga 27517
| | | | | || | ||| | | || | | || | || || ||||||
Sbjct 333 GATAGGCGGCGATAAATGTCCAAGTAGTGCTTTTGAGTGTT-ACGAGCAATTGAAAATGG 391
Query 27518 taaaTGCTCTAATTAACGGTTATGAAGTTGATGAACCTAAATATAAATTTTATAATTTTT 27577
| | ||| | |||||||||||||||||| ||||||||||| ||| |||||||| ||||
Sbjct 392 TTGAAGCTGTCATTAACGGTTATGAAGTTATTGAACCTAAATTTAAGTTTTATAACTTTT 451
Query 27578 CTGATATTACCAGCGTTAGAAGATTATATTATACAGGGAAAAATAGACAATTCACTGAAA 27637
|||||| || | | | | |||||||||| | || | || |||||| || |||
Sbjct 452 CTGATAGTAGCGGAGGAACTGCATTATATTATGCTGGACAGTCTAAACAATTAAC--AAA 509
Query 27638 ATT--ATTTTGAAGGTAAAGATATTGAAAAGGATAGCGTTGAATATTTAGCTTTGGAAAG 27695
||| | || | | || || || ||| |||| |||||| ||||||| |
Sbjct 510 ATTCGAGCAAGATGCTCTTGAAGTTAAAGAGGGGAGCGAGGAATATAAAGCTTTGTTAGC 569
Query 27696 TTTAGGCTTTCG-TAAAGAAGAAGTATGATAACATCTTTT 27734
|||||| ||||| | |||||||||||||||||||||||||
Sbjct 570 TTTAGG-TTTCGTTGAAGAAGAAGTATGATAACATCTTTT 608
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 415891706588946
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |