Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_027348.1 Length=73990 Score E Sequences producing significant alignments: (Bits) Value seq754 96.9 2e-15 >seq754 Length=71200 Score = 96.9 bits (106), Expect = 2e-15 Identities = 159/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 21588 CATCTGGGACGAATGGGCTGGTCCTGATGGCGGCCTCGGCCCGATCTATGGTGCCCAGTG 21647 |||||||||||||||||| | | | ||| ||| |||||| | || || ||||| Sbjct 66249 CATCTGGGACGAATGGGCAGATGAAAACGGCAACCTGGGCCCGGTTTACGGCAAGCAGTG 66308 Query 21648 GCGCAGCAT--CCAAGGCCCCGATGGAAAGAACATCGACCAGCTGGCCAAGGCACAAGAG 21705 |||| |||| |||| ||| ||||| | || |||||| | ||| | | Sbjct 66309 GCGC-GCATGGCCAACGCCT-GATGGCCGCCATATTGACCAGATCACCACCGTGATGAAC 66366 Query 21706 CTGCTGCTGAACGACCCGGACAGCCGCCGCATCATCGTGAATGCCTGGAACGTGGCCGAG 21765 | |||| ||||| || ||| ||||| ||||| || ||||||||||| | |||| Sbjct 66367 CAGCTGAAAAACGATCCAGACTCGCGCCGAATCATTGTTTCCGCCTGGAACGTCGGCGAG 66426 Query 21766 CTCGACCAGATGGCCCTGACACCGTGCCATGCGATGTTCCAGTTCT 21811 || ||| | ||||| ||| |||||||||| ||| | |||||||||| Sbjct 66427 CTGGACAAAATGGCGCTGGCACCGTGCCACGCGTTCTTCCAGTTCT 66472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 236638025944334