Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_027352.1 Length=159492 Score E Sequences producing significant alignments: (Bits) Value seq955 87.8 2e-12 seq952 87.8 2e-12 >seq955 Length=33606 Score = 87.8 bits (96), Expect = 2e-12 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 157752 CTGTAGGATTCGAACCCACGACCTACTGCTTACAAGGCAGTCGCTCTAACCAACTGAGCT 157811 |||||||||||||||| ||||||||| ||||| ||||| || |||||| ||||||||||| Sbjct 1437 CTGTAGGATTCGAACCTACGACCTACGGCTTAGAAGGCCGTTGCTCTATCCAACTGAGCT 1496 Query 157812 AAG 157814 ||| Sbjct 1497 AAG 1499 >seq952 Length=33737 Score = 87.8 bits (96), Expect = 2e-12 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 157752 CTGTAGGATTCGAACCCACGACCTACTGCTTACAAGGCAGTCGCTCTAACCAACTGAGCT 157811 |||||||||||||||| ||||||||| ||||| ||||| || |||||| ||||||||||| Sbjct 12076 CTGTAGGATTCGAACCTACGACCTACGGCTTAGAAGGCCGTTGCTCTATCCAACTGAGCT 12135 Query 157812 AAG 157814 ||| Sbjct 12136 AAG 12138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510234957724480