Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_027398.1 Length=38742 Score E Sequences producing significant alignments: (Bits) Value seq997 145 2e-30 >seq997 Length=29618 Score = 145 bits (160), Expect = 2e-30 Identities = 301/453 (66%), Gaps = 24/453 (5%) Strand=Plus/Minus Query 36748 ATGAGCAGAGTAACTGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCAGCCTGTCA 36807 |||||| || |||| ||||| |||| |||| | ||||||||| | | ||| || | Sbjct 18254 ATGAGCTGATTAACCGCGATCATCTGCGCTGTCGTTATCTGCCTGCTGGTCTTTATGGCT 18195 Query 36808 TGGGCTGTTAATCATTACCGTGATAATGCAATCGCCTACAAAGAGCAGCGCGATAAAGCC 36867 ||||| |||| || || || || || || ||| |||||||||||||||||||||||||| Sbjct 18194 TGGGCGATTAACCACTATCGCGACAACGCCATCACCTACAAAGAGCAGCGCGATAAAGCC 18135 Query 36868 AC---------------------ATCCACAATCGCTGACATGCAGAAGCGTCAACGTGAT 36906 || |||| ||| |||||||||| || || |||||| Sbjct 18134 ACTGAGAAACTCAGCCAGGCCAACGCCACCATCAAAGACATGCAGACCCGCCAGCGTGAT 18075 Query 36907 GTAGCAGAACTTGACGCCAGATACACAAAGGAGCTTGCTGATGCTAACGCGACTATCGAA 36966 | || | || || |||| |||||| || | |||||||| || | | || || Sbjct 18074 GCCGCTGCGCTGGATGCCAAATACACTGGAGAACCGGCTGATGCGAAAGATATCATTGAG 18015 Query 36967 AGCCTCCGTGCTGATGTTTCTGCTGGGCGTAAGCGCCTGCAAGTCGCCGCCACCTGT--- 37023 | || | | ||||| |||||| |||||||| ||||| || ||| | |||| Sbjct 18014 CGTCTGCATAGCGATGTCATTGCTGGCCGTAAGCGGCTGCAGCTCAACGCAAACTGTCCC 17955 Query 37024 GCAAAGTCAACGACCGGAGCCAGCAGCATGGGCGATGGAGAAAGCCCAAGACTTACAGCA 37083 || || | ||||||| || || |||||||||||| |||| |||||||| | Sbjct 17954 GCGAACGGAGCGACCGGCACCGGCGGCATGGGCGATGCTTCCGGCCCCAGACTTACTGAC 17895 Query 37084 GATGCTGAACTCAATTATTACCGTCTCAGAAGTGGAATCGACAGGATAACCGCGCAGGTT 37143 ||||||| |||||| | ||||||| |||||| || | || |||||| Sbjct 17894 TCCGCTGAACGGGATTATTTCATCCTCAGAAAGCGAATCGTCACAGTGACGAAGCAGGTC 17835 Query 37144 AACTACCTGCAGGAATACATCAGGACGCAATGC 37176 ||| |||||| | ||||| || || || ||| Sbjct 17834 GGCTATCTGCAGAACTACATAAGCACTCAGTGC 17802 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123850161470912