Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_027398.1
Length=38742
Score E
Sequences producing significant alignments: (Bits) Value
seq997 145 2e-30
>seq997
Length=29618
Score = 145 bits (160), Expect = 2e-30
Identities = 301/453 (66%), Gaps = 24/453 (5%)
Strand=Plus/Minus
Query 36748 ATGAGCAGAGTAACTGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCAGCCTGTCA 36807
|||||| || |||| ||||| |||| |||| | ||||||||| | | ||| || |
Sbjct 18254 ATGAGCTGATTAACCGCGATCATCTGCGCTGTCGTTATCTGCCTGCTGGTCTTTATGGCT 18195
Query 36808 TGGGCTGTTAATCATTACCGTGATAATGCAATCGCCTACAAAGAGCAGCGCGATAAAGCC 36867
||||| |||| || || || || || || ||| ||||||||||||||||||||||||||
Sbjct 18194 TGGGCGATTAACCACTATCGCGACAACGCCATCACCTACAAAGAGCAGCGCGATAAAGCC 18135
Query 36868 AC---------------------ATCCACAATCGCTGACATGCAGAAGCGTCAACGTGAT 36906
|| |||| ||| |||||||||| || || ||||||
Sbjct 18134 ACTGAGAAACTCAGCCAGGCCAACGCCACCATCAAAGACATGCAGACCCGCCAGCGTGAT 18075
Query 36907 GTAGCAGAACTTGACGCCAGATACACAAAGGAGCTTGCTGATGCTAACGCGACTATCGAA 36966
| || | || || |||| |||||| || | |||||||| || | | || ||
Sbjct 18074 GCCGCTGCGCTGGATGCCAAATACACTGGAGAACCGGCTGATGCGAAAGATATCATTGAG 18015
Query 36967 AGCCTCCGTGCTGATGTTTCTGCTGGGCGTAAGCGCCTGCAAGTCGCCGCCACCTGT--- 37023
| || | | ||||| |||||| |||||||| ||||| || ||| | ||||
Sbjct 18014 CGTCTGCATAGCGATGTCATTGCTGGCCGTAAGCGGCTGCAGCTCAACGCAAACTGTCCC 17955
Query 37024 GCAAAGTCAACGACCGGAGCCAGCAGCATGGGCGATGGAGAAAGCCCAAGACTTACAGCA 37083
|| || | ||||||| || || |||||||||||| |||| |||||||| |
Sbjct 17954 GCGAACGGAGCGACCGGCACCGGCGGCATGGGCGATGCTTCCGGCCCCAGACTTACTGAC 17895
Query 37084 GATGCTGAACTCAATTATTACCGTCTCAGAAGTGGAATCGACAGGATAACCGCGCAGGTT 37143
||||||| |||||| | ||||||| |||||| || | || ||||||
Sbjct 17894 TCCGCTGAACGGGATTATTTCATCCTCAGAAAGCGAATCGTCACAGTGACGAAGCAGGTC 17835
Query 37144 AACTACCTGCAGGAATACATCAGGACGCAATGC 37176
||| |||||| | ||||| || || || |||
Sbjct 17834 GGCTATCTGCAGAACTACATAAGCACTCAGTGC 17802
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 123850161470912
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |