Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_027402.1 Length=240413 Score E Sequences producing significant alignments: (Bits) Value seq754 136 6e-27 >seq754 Length=71200 Score = 136 bits (150), Expect = 6e-27 Identities = 196/275 (71%), Gaps = 6/275 (2%) Strand=Plus/Plus Query 198329 CTTTCATGTCAGCTCTATCAACG---CAGTGCGGATTTTTTCCTCGGCGTGCCGTTCAAC 198385 || || || |||||||| || || | ||| || | ||||||||| ||||||| ||| Sbjct 66490 CTCTCCTGCCAGCTCTACCAGCGTTCCTGTG---ATGTGTTCCTCGGCCTGCCGTTTAAC 66546 Query 198386 ATCGCGTCTTACGCATTACTCGTGCACATGGTTGCCCAGCAGGTTAACATGGTGCCGGGC 198445 || || || || | | || || ||| | || |||||| | || ||| ||| Sbjct 66547 ATTGCCAGCTATGCGCTGTTAGTCCATATGATGGCGCAGCAGTGTGACCTGGAAGTGGGG 66606 Query 198446 GATTTCATTTGGACGGGCGGTGACACACATCTCTACTCTAATCATCTGGAGCAGGCCAAG 198505 ||||| | ||||| || || ||||| ||||||||| || ||| |||||||| || | Sbjct 66607 GATTTTGTCTGGACCGGTGGGGACACCCATCTCTACAGCAACCATATGGAGCAGACCCAT 66666 Query 198506 CTCCAGCTGACGCGTGAGCCGTTACCTTTACCGAAACTGATCATCAAGCGTAAACCGGAA 198565 ||||||||||| || || ||| | | ||||| || ||||||||||| ||||||| Sbjct 66667 CTCCAGCTGACCCGCGAACCGCGCGCGCTGCCGAAGCTCATCATCAAGCGCAAACCGGCG 66726 Query 198566 TCTATCTTCGATTATAAATTCGAAGATTTTGAGAT 198600 || ||||| || || ||||| ||||||||||| Sbjct 66727 TCAATCTTTGACTACCGCTTCGATGATTTTGAGAT 66761 Score = 132 bits (146), Expect = 7e-26 Identities = 196/275 (71%), Gaps = 2/275 (1%) Strand=Plus/Plus Query 197613 TGAAACAATATCTTGAGATGATGCAGAACATTCTGGACGAGGGTCATGTT-AAAGGCGAT 197671 ||||||| |||||||| ||||| | || | || || ||||| || | ||| ||| Sbjct 66017 TGAAACAGTATCTTGAATTGATGAAAAAAGTGCTCGATGAGGG-CACGCCGAAAAACGAC 66075 Query 197672 CGTACTGGAACAGGGACGCTTTCTGTCTTTGGACGCCAGATGCGTTTTGATTTGCGTAAA 197731 ||||| || || || ||||| || | ||||| | ||||||||| || |||| | || Sbjct 66076 CGTACCGGCACCGGTACGCTCTCCATTTTTGGCCACCAGATGCGCTTCAATTTACAGGAA 66135 Query 197732 GGTTTCCCGTTAGTCACGACTAAGAAACTCCACCTGCGTTCTATTATCCATGAACTGCTG 197791 || ||||| | || ||||||||| ||| ||||| || || || ||||||||||| Sbjct 66136 GGCTTCCCTCTGGTGACGACTAAGCGCTGCCATCTGCGCTCGATCATTCATGAACTGCTC 66195 Query 197792 TGGTTCCTTAGTGGGGATACCAACACCAAATATCTGGAAGATAACGGCGTTACCATTTGG 197851 |||||||| || ||||||||| |||||| | || ||| ||| |||| ||| Sbjct 66196 TGGTTCCTGCAAGGCGATACCAACGTTGCGTATCTGCACGAAAACAACGTCTCCATCTGG 66255 Query 197852 CGGGAGTGGCAAGATGAAAATGGGAACCTTGGCCC 197886 || ||| ||||||||| || ||||| ||||| Sbjct 66256 GACGAATGGGCAGATGAAAACGGCAACCTGGGCCC 66290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 769176350833520