Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_027402.1
Length=240413
Score E
Sequences producing significant alignments: (Bits) Value
seq754 136 6e-27
>seq754
Length=71200
Score = 136 bits (150), Expect = 6e-27
Identities = 196/275 (71%), Gaps = 6/275 (2%)
Strand=Plus/Plus
Query 198329 CTTTCATGTCAGCTCTATCAACG---CAGTGCGGATTTTTTCCTCGGCGTGCCGTTCAAC 198385
|| || || |||||||| || || | ||| || | ||||||||| ||||||| |||
Sbjct 66490 CTCTCCTGCCAGCTCTACCAGCGTTCCTGTG---ATGTGTTCCTCGGCCTGCCGTTTAAC 66546
Query 198386 ATCGCGTCTTACGCATTACTCGTGCACATGGTTGCCCAGCAGGTTAACATGGTGCCGGGC 198445
|| || || || | | || || ||| | || |||||| | || ||| |||
Sbjct 66547 ATTGCCAGCTATGCGCTGTTAGTCCATATGATGGCGCAGCAGTGTGACCTGGAAGTGGGG 66606
Query 198446 GATTTCATTTGGACGGGCGGTGACACACATCTCTACTCTAATCATCTGGAGCAGGCCAAG 198505
||||| | ||||| || || ||||| ||||||||| || ||| |||||||| || |
Sbjct 66607 GATTTTGTCTGGACCGGTGGGGACACCCATCTCTACAGCAACCATATGGAGCAGACCCAT 66666
Query 198506 CTCCAGCTGACGCGTGAGCCGTTACCTTTACCGAAACTGATCATCAAGCGTAAACCGGAA 198565
||||||||||| || || ||| | | ||||| || ||||||||||| |||||||
Sbjct 66667 CTCCAGCTGACCCGCGAACCGCGCGCGCTGCCGAAGCTCATCATCAAGCGCAAACCGGCG 66726
Query 198566 TCTATCTTCGATTATAAATTCGAAGATTTTGAGAT 198600
|| ||||| || || ||||| |||||||||||
Sbjct 66727 TCAATCTTTGACTACCGCTTCGATGATTTTGAGAT 66761
Score = 132 bits (146), Expect = 7e-26
Identities = 196/275 (71%), Gaps = 2/275 (1%)
Strand=Plus/Plus
Query 197613 TGAAACAATATCTTGAGATGATGCAGAACATTCTGGACGAGGGTCATGTT-AAAGGCGAT 197671
||||||| |||||||| ||||| | || | || || ||||| || | ||| |||
Sbjct 66017 TGAAACAGTATCTTGAATTGATGAAAAAAGTGCTCGATGAGGG-CACGCCGAAAAACGAC 66075
Query 197672 CGTACTGGAACAGGGACGCTTTCTGTCTTTGGACGCCAGATGCGTTTTGATTTGCGTAAA 197731
||||| || || || ||||| || | ||||| | ||||||||| || |||| | ||
Sbjct 66076 CGTACCGGCACCGGTACGCTCTCCATTTTTGGCCACCAGATGCGCTTCAATTTACAGGAA 66135
Query 197732 GGTTTCCCGTTAGTCACGACTAAGAAACTCCACCTGCGTTCTATTATCCATGAACTGCTG 197791
|| ||||| | || ||||||||| ||| ||||| || || || |||||||||||
Sbjct 66136 GGCTTCCCTCTGGTGACGACTAAGCGCTGCCATCTGCGCTCGATCATTCATGAACTGCTC 66195
Query 197792 TGGTTCCTTAGTGGGGATACCAACACCAAATATCTGGAAGATAACGGCGTTACCATTTGG 197851
|||||||| || ||||||||| |||||| | || ||| ||| |||| |||
Sbjct 66196 TGGTTCCTGCAAGGCGATACCAACGTTGCGTATCTGCACGAAAACAACGTCTCCATCTGG 66255
Query 197852 CGGGAGTGGCAAGATGAAAATGGGAACCTTGGCCC 197886
|| ||| ||||||||| || ||||| |||||
Sbjct 66256 GACGAATGGGCAGATGAAAACGGCAACCTGGGCCC 66290
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 769176350833520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |