Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq170 84.2 2e-11 seq117 84.2 2e-11 >seq170 Length=689707 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/193 (70%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 41014 TATTGTGCGCGTGGAACCCAACGGACGT---ACATTTGATGGCATTGCCACCTTGTCATT 41070 || |||| || ||||||||| | || | ||| |||||||||||||| ||||||| Sbjct 654131 TAATGTGTGCATGGAACCCATCAGATCTTGGACAA---ATGGCATTGCCACCATGTCATT 654187 Query 41071 TGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAG 41130 | ||||| |||| || ||| | || || |||| | |||| || | | Sbjct 654188 GCCTTGCGCAGTTCCACGTGGCCAGTGGCAAGCTCTCCTGTCTACTGTACCAGCGGAGTG 654247 Query 41131 GTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGA 41190 |||||||| || || || || || |||||||| || || ||||||||||| |||||| Sbjct 654248 CAGACATGGGCCTGGGTGTGCCATTCAACATAGCCAGCTACGCTCTGCTCACCCATATGA 654307 Query 41191 TTGCACACGTTAC 41203 | ||||| |||| Sbjct 654308 TAGCACATATTAC 654320 >seq117 Length=882221 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/193 (70%), Gaps = 6/193 (3%) Strand=Plus/Minus Query 41014 TATTGTGCGCGTGGAACCCAACGGACGT---ACATTTGATGGCATTGCCACCTTGTCATT 41070 || |||| || ||||||||| | || | ||| |||||||||||||| ||||||| Sbjct 413229 TAATGTGTGCATGGAACCCATCAGATCTTGGACAA---ATGGCATTGCCACCATGTCATT 413173 Query 41071 TGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAG 41130 | ||||| |||| || ||| | || || |||| | |||| || | | Sbjct 413172 GCCTTGCACAGTTCCACGTGGCCAGTGGCAAGCTCTCCTGTCTACTGTACCAGCGGAGTG 413113 Query 41131 GTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGA 41190 |||||||| || || || || || |||||||| || || ||||||||||| |||||| Sbjct 413112 CAGACATGGGCCTGGGTGTGCCATTCAACATAGCCAGCTACGCTCTGCTCACCCATATGA 413053 Query 41191 TTGCACACGTTAC 41203 | ||||| |||| Sbjct 413052 TAGCACATATTAC 413040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397447309872970