Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq170 84.2 2e-11
seq117 84.2 2e-11
>seq170
Length=689707
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/193 (70%), Gaps = 6/193 (3%)
Strand=Plus/Plus
Query 41014 TATTGTGCGCGTGGAACCCAACGGACGT---ACATTTGATGGCATTGCCACCTTGTCATT 41070
|| |||| || ||||||||| | || | ||| |||||||||||||| |||||||
Sbjct 654131 TAATGTGTGCATGGAACCCATCAGATCTTGGACAA---ATGGCATTGCCACCATGTCATT 654187
Query 41071 TGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAG 41130
| ||||| |||| || ||| | || || |||| | |||| || | |
Sbjct 654188 GCCTTGCGCAGTTCCACGTGGCCAGTGGCAAGCTCTCCTGTCTACTGTACCAGCGGAGTG 654247
Query 41131 GTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGA 41190
|||||||| || || || || || |||||||| || || ||||||||||| ||||||
Sbjct 654248 CAGACATGGGCCTGGGTGTGCCATTCAACATAGCCAGCTACGCTCTGCTCACCCATATGA 654307
Query 41191 TTGCACACGTTAC 41203
| ||||| ||||
Sbjct 654308 TAGCACATATTAC 654320
>seq117
Length=882221
Score = 84.2 bits (92), Expect = 2e-11
Identities = 135/193 (70%), Gaps = 6/193 (3%)
Strand=Plus/Minus
Query 41014 TATTGTGCGCGTGGAACCCAACGGACGT---ACATTTGATGGCATTGCCACCTTGTCATT 41070
|| |||| || ||||||||| | || | ||| |||||||||||||| |||||||
Sbjct 413229 TAATGTGTGCATGGAACCCATCAGATCTTGGACAA---ATGGCATTGCCACCATGTCATT 413173
Query 41071 TGTTATGTCAGTTTTACGTTTGCAATGGTGAACTGTCATGTCAATTGTATCAAAGATCAG 41130
| ||||| |||| || ||| | || || |||| | |||| || | |
Sbjct 413172 GCCTTGCACAGTTCCACGTGGCCAGTGGCAAGCTCTCCTGTCTACTGTACCAGCGGAGTG 413113
Query 41131 GTGACATGGGACTAGGGGTCCCGTTTAACATAGCGAGTTATGCTCTGCTCACGTATATGA 41190
|||||||| || || || || || |||||||| || || ||||||||||| ||||||
Sbjct 413112 CAGACATGGGCCTGGGTGTGCCATTCAACATAGCCAGCTACGCTCTGCTCACCCATATGA 413053
Query 41191 TTGCACACGTTAC 41203
| ||||| ||||
Sbjct 413052 TAGCACATATTAC 413040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397447309872970
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |