Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_027991.1 Length=147303 Score E Sequences producing significant alignments: (Bits) Value seq1107 363 1e-95 >seq1107 Length=21508 Score = 363 bits (402), Expect = 1e-95 Identities = 315/391 (81%), Gaps = 0/391 (0%) Strand=Plus/Plus Query 57689 ATGGCGCTCCAGTCTTCCCGACCGCGGCCTGCGGCCCGCGCCAGGTTATAAACTTCACGG 57748 ||||| ||||||| || || ||||| || ||||| || ||| |||| |||||||| ||| Sbjct 2973 ATGGCCGTCCAGTCCTCGCGCCCGCGCCCAGCGGCGCGTGCCTGGTTGTAAACTTCGCGG 3032 Query 57749 GAGGCGGCGCCGAGCGGCATCGGTACGTGCAGTTGATTGGCGACATCCAACGCGATGCCA 57808 || || ||||| ||||||||||| ||||| || || ||||| || || | ||||| || Sbjct 3033 GAAGCCGCGCCCAGCGGCATCGGAACGTGGAGCTGGTTGGCCACGTCGAGGGCGATCCCC 3092 Query 57809 AGATCTTTGTGCGCCAGATCGATCATGAAGGCGGGAGACAGATCTCCTTTCATCACTTTA 57868 |||||||| ||||| || |||||||||||||||||||| ||||| ||||||| ||| || Sbjct 3093 AGATCTTTATGCGCAAGGTCGATCATGAAGGCGGGAGAAAGATCCCCTTTCAGCACCTTG 3152 Query 57869 TTCGGCCAGGTGGTGGTGAAATGCCCTTTGCCTGCGGCAGTGCCGCTCATCACTTTTAAA 57928 |||||||||| || ||||| || ||||| || || | || |||||||| || || | Sbjct 3153 TTCGGCCAGGATGTCGTGAAGTGGCCTTTACCCGCAGGCGTACCGCTCATGACCTTGAGC 3212 Query 57929 GCCACGTCGAAGGAAAGCCCCAGCGCTTCACACAGCACGGCGGCTTCGGCGGAGAGCGCA 57988 |||||||| ||||| || || |||||||| |||||||||||||| |||||||| || || Sbjct 3213 GCCACGTCAAAGGAGAGGCCAAGCGCTTCGCACAGCACGGCGGCCTCGGCGGAAAGGGCG 3272 Query 57989 TTTAGCGCAATACTCATGTAGTTGTTGATCAGTTTTACGCGAATACCCATTCCCGGGCCG 58048 || || ||||| ||||||||||| ||||| || || ||||| || ||||| || || ||| Sbjct 3273 TTCAGGGCAATGCTCATGTAGTTATTGATAAGCTTCACGCGGATGCCCATGCCTGGCCCG 3332 Query 58049 CCGGTGTTGACCAGCTCATTACCCATCGGCA 58079 |||| ||| | ||||||||| ||||||| || Sbjct 3333 CCGGCGTTAATCAGCTCATTGCCCATCGCCA 3363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471231032407120