Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_027993.1
Length=43587
Score E
Sequences producing significant alignments: (Bits) Value
seq997 118 3e-22
>seq997
Length=29618
Score = 118 bits (130), Expect = 3e-22
Identities = 247/360 (69%), Gaps = 10/360 (3%)
Strand=Plus/Minus
Query 147 CCTGGGTTACTTCGGCCCGACATACCCGGCTATCCGTGACATCTTCTACCCGACATTTGA 206
|| |||||| |||| ||||| |||||| ||||||||||||||||||||||| ||||
Sbjct 14204 CCAGGGTTATTTCGCGCCGACGTACCCGCAGATCCGTGACATCTTCTACCCGACGATTGA 14145
Query 207 GGAAGCCGC--TAACCTGCTCGGCCTCGATGTGCTGGTTAAATCTGGCGACAAAGAAGTC 264
|| | ||| | ||| || || || | | || || ||||||| ||
Sbjct 14144 AGAGGTCGCCTTTGACTGG--GGGCTGAGCGTCATAATCAATGAGGGGAACAAAGAGGT- 14088
Query 265 GTGGTTACT-CGCGGTAAGACGGTGCT-CGGTACAGTTATCTGCCGTTCTATGGATAACC 322
| | || || || |||| | | ||| || ||||||||||| ||||| || |
Sbjct 14087 -TCACTTCTACGAGGGGCGACGATACCGCGGGACCACAATCTGCCGTTCAATGGAGAAGC 14029
Query 323 CAGGCTCGATAGTCGGCTTCAAAATCGCTGCTGCGGTCGTGGATGAGCTTGATGT-ATTG 381
| || ||||||||||| |||||||||| | ||| | || |||||||| || || || |
Sbjct 14028 CCGGATCGATAGTCGGTTTCAAAATCGGTAACGCGATGGTTGATGAGCTGGACGTCATGG 13969
Query 382 AGCCGTGAGAAAGCTGAGCTGGCGTGGAACAAAATTGTCGCCCGTATGCGTCTTGTTATT 441
| | | ||||| | | ||| ||| ||||| | |||||||||||| ||
Sbjct 13968 CGGC-AGCCAAAGCGCAACAGGCATGGCGAAAAATCATAGCCCGTATGCGTTACAAGGTT 13910
Query 442 CCTGGTGTAATTAACCACATCTCTGTCACCACGACACCGGAAGGGTTCAAGTTCGTCTAC 501
||| | |||| |||| ||||||||| || || |||||||||||||||||||||
Sbjct 13909 GATGGGTTGCGTAACGGCATCGATGTCACCACAACGCCAGAAGGGTTCAAGTTCGTCTAC 13850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 139353831177572
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |