Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_027993.1 Length=43587 Score E Sequences producing significant alignments: (Bits) Value seq997 118 3e-22 >seq997 Length=29618 Score = 118 bits (130), Expect = 3e-22 Identities = 247/360 (69%), Gaps = 10/360 (3%) Strand=Plus/Minus Query 147 CCTGGGTTACTTCGGCCCGACATACCCGGCTATCCGTGACATCTTCTACCCGACATTTGA 206 || |||||| |||| ||||| |||||| ||||||||||||||||||||||| |||| Sbjct 14204 CCAGGGTTATTTCGCGCCGACGTACCCGCAGATCCGTGACATCTTCTACCCGACGATTGA 14145 Query 207 GGAAGCCGC--TAACCTGCTCGGCCTCGATGTGCTGGTTAAATCTGGCGACAAAGAAGTC 264 || | ||| | ||| || || || | | || || ||||||| || Sbjct 14144 AGAGGTCGCCTTTGACTGG--GGGCTGAGCGTCATAATCAATGAGGGGAACAAAGAGGT- 14088 Query 265 GTGGTTACT-CGCGGTAAGACGGTGCT-CGGTACAGTTATCTGCCGTTCTATGGATAACC 322 | | || || || |||| | | ||| || ||||||||||| ||||| || | Sbjct 14087 -TCACTTCTACGAGGGGCGACGATACCGCGGGACCACAATCTGCCGTTCAATGGAGAAGC 14029 Query 323 CAGGCTCGATAGTCGGCTTCAAAATCGCTGCTGCGGTCGTGGATGAGCTTGATGT-ATTG 381 | || ||||||||||| |||||||||| | ||| | || |||||||| || || || | Sbjct 14028 CCGGATCGATAGTCGGTTTCAAAATCGGTAACGCGATGGTTGATGAGCTGGACGTCATGG 13969 Query 382 AGCCGTGAGAAAGCTGAGCTGGCGTGGAACAAAATTGTCGCCCGTATGCGTCTTGTTATT 441 | | | ||||| | | ||| ||| ||||| | |||||||||||| || Sbjct 13968 CGGC-AGCCAAAGCGCAACAGGCATGGCGAAAAATCATAGCCCGTATGCGTTACAAGGTT 13910 Query 442 CCTGGTGTAATTAACCACATCTCTGTCACCACGACACCGGAAGGGTTCAAGTTCGTCTAC 501 ||| | |||| |||| ||||||||| || || ||||||||||||||||||||| Sbjct 13909 GATGGGTTGCGTAACGGCATCGATGTCACCACAACGCCAGAAGGGTTCAAGTTCGTCTAC 13850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139353831177572