Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_027994.1 Length=41632 Score E Sequences producing significant alignments: (Bits) Value seq997 114 3e-21 >seq997 Length=29618 Score = 114 bits (126), Expect = 3e-21 Identities = 250/364 (69%), Gaps = 18/364 (5%) Strand=Plus/Minus Query 147 CCTGGGTTACTTCGGCCCGACATACCCGGCTATCCGTGACATCTTCTACCCGACATTTGA 206 || |||||| |||| ||||| |||||| ||||||||||||||||||||||| |||| Sbjct 14204 CCAGGGTTATTTCGCGCCGACGTACCCGCAGATCCGTGACATCTTCTACCCGACGATTGA 14145 Query 207 GGAAGCCGC--TAACCTGCTCGGCCTCGATGTGCTGGTTAAATCTGGCGACAAAGAAGTC 264 || | ||| | ||| || || || | | || || ||||||| || Sbjct 14144 AGAGGTCGCCTTTGACTGG--GGGCTGAGCGTCATAATCAATGAGGGGAACAAAGAGGT- 14088 Query 265 GTGGTTACT-CGCGGTAAGACGGTGCT-CGGTACAGTTATCTGCCGTTCTATGGATAACC 322 | | || || || |||| | | ||| || ||||||||||| ||||| || | Sbjct 14087 -TCACTTCTACGAGGGGCGACGATACCGCGGGACCACAATCTGCCGTTCAATGGAGAAGC 14029 Query 323 CAGGCTCGATAGTCGGCTTCAAAATCGCTGCTGCGGTCGTGGATGAGCTTGATGT-ATTG 381 | || ||||||||||| |||||||||| | ||| | || |||||||| || || || | Sbjct 14028 CCGGATCGATAGTCGGTTTCAAAATCGGTAACGCGATGGTTGATGAGCTGGACGTCATGG 13969 Query 382 AGCCGTGAGAAAGCTGAGCTGGCGTGGAACAAAATAGTCGCCCGTATGCGT---CTGGTT 438 | | | ||||| | | ||| ||| ||||| | |||||||||||| |||| Sbjct 13968 CGGC-AGCCAAAGCGCAACAGGCATGGCGAAAAATCATAGCCCGTATGCGTTACAAGGTT 13910 Query 439 -ATCCCCGGCGTAACTAACCACATCTCTGTCACCACGACACCGGAAGGGTTCAAGTTCGT 497 || || | |||| |||| ||||||||| || || ||||||||||||||||| Sbjct 13909 GAT----GGGTTGCGTAACGGCATCGATGTCACCACAACGCCAGAAGGGTTCAAGTTCGT 13854 Query 498 CTAC 501 |||| Sbjct 13853 CTAC 13850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133097964453832