Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq813 132 1e-26 >seq813 Length=55966 Score = 132 bits (146), Expect = 1e-26 Identities = 184/258 (71%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 41199 GGCAACGATCCAGAAATCCGTTACATGCCAAGCGGCGGCGCGGTTGCTAATCTAAGCATC 41258 ||| | || || ||| | || |||||||| || || ||||| ||||| || | | | Sbjct 13738 GGCCAGGACCCGGAAGTACGCTACATGCCGAGTGGTGGCGCAGTTGCCAACATTACGCTG 13679 Query 41259 GCCACAACTGAAAGCTGGAAGGATAAAACCACCGGCGAGAAGAAAGAACAAACGGAATGG 41318 || || | ||| |||| |||||| | ||||| |||| |||||| || || |||||| Sbjct 13678 GCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACTGAATGG 13619 Query 41319 CACCGCGTTGTCATCTTCGGTAAGCTGGCAGAAATTGCTAGCGAATACCTGCGCAAAGGT 41378 |||||||| || | || || || ||||||||| |||| | || || ||||| |||||| Sbjct 13618 CACCGCGTGGTGCTGTTTGGCAAACTGGCAGAAGTTGCCGGTGAGTATCTGCGTAAAGGT 13559 Query 41379 AGCAAGGTGTTCATTGAAGGCAGCCTGCGAACGCGTAAATGGCAGGACCAGGCTGGCGTT 41438 |||| | || |||||| ||||| || ||||||||| || ||| | |||| | Sbjct 13558 TCTCAGGTCTATATCGAAGGCCAACTGCGCACCCGTAAATGGACCGATCAGTCCGGCGCT 13499 Query 41439 GATCGCTACACCACTGAA 41456 || |||||||| ||| Sbjct 13498 GAGAAGTACACCACCGAA 13481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133206762135984