Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq486 122 1e-22
>seq486
Length=217039
Score = 122 bits (134), Expect = 1e-22
Identities = 866/1376 (63%), Gaps = 38/1376 (3%)
Strand=Plus/Plus
Query 118194 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATG 118253
||| |||||||||| | |||||||| || | || || || |||||||| |||||||||
Sbjct 175155 GTGAATGGCTCAAATGATTCATTGTTGCCAAGAATCTGTGCAGTGGAGGCGGTGGGCATG 175214
Query 118254 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCC 118313
|| |||| | || ||| || || || | || | || | ||| ||||| |
Sbjct 175215 GGGGCCAGCAACAGAGAGTTCCGCAGGCCATGTTTCGCGATCTTCTGCTTCAGAGCACTC 175274
Query 118314 CAGTCGTA---GT-TGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTG 118369
||||| | || || | | |||| ||| ||||| ||| | || | || ||||
Sbjct 175275 CAGTCCCACAGGTCTGTGGGT-GTCTTTCCC---CACATTTCATATTGCAATATTCCTTC 175330
Query 118370 GGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCT 118429
|| || | || || | || ||||| ||| || |||| ||| ||||
Sbjct 175331 ACTGGCCGGACAACCAGCATACGTTTCATAAACGCCGAGTTTTTCGGCCAGTTCACAGCT 175390
Query 118430 CGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTC 118489
|| || | || | | ||| || |||||||| || | ||| | || ||| |
Sbjct 175391 AGCTTCTAAAGCCCCATAATAGATGGTTTCAAATATTTGTTGATTGAGCTTCTGGGCTCC 175450
Query 118490 GTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAG 118549
|| || | | || || ||| | ||| |||| || ||||||||||| || |
Sbjct 175451 TTCACTCTCGTAAGGAAGGCGCATCAATACAAAAGCATCGGCCAGACCTTGGACGCCAAT 175510
Query 118550 GCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC-ACGGGATAAAAATTCC 118608
||| || || || || ||||| |||||||| || ||| |||||||| ||||
Sbjct 175511 GCCGATAGGTCGGTGCCTCATGTTAGACTTTTTCGCT-TCTGGGACGGGATAGTAATTAA 175569
Query 118609 TATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGT 118668
|||||||| | | || || || | || | | || || | || | || || ||
Sbjct 175570 CATCGATAATCTTGTTCAGGTTCTCAGTTATGATTTTGGTCACTTGTTTTAGTTTCTCAA 175629
Query 118669 AATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTAC 118728
||||| | | | | ||| | ||| || | | || |||||||||| || |
Sbjct 175630 AATCATATGTTTTATT---TTCGGTTACAAACATGTTGACAGCAATTGACGCCAAGTTGC 175686
Query 118729 ACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCT 118788
| |||| ||||| | |||||||| | ||| |||||||| | || | |
Sbjct 175687 AAACAGCTACTTCATCAGCAGATGTGTACTCAACAATCTCCGTGCATAGATTGCTGCATT 175746
Query 118789 TAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGT 118848
| ||||| ||||| ||||||||||| |||| |||| || ||||| |||||||||||||
Sbjct 175747 TGATGGTTCCCAAATTCTTTTGATTGCTCTTTCTGTTGCATGCATCTTTGTAAAGCATGT 175806
Query 118849 ATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGC 118907
|||| || || ||||| ||| | || | |||||||||||| | || | ||| |
Sbjct 175807 ATGGAGTTCCAGTCTCTACTTGTGCCTCAATAATAGCCTTCCATAGGATTTG-AGCGCGG 175865
Query 118908 ACAGTGGCGTTGGC---TCGCCCCTCTTCCTCGTACTTTGTG-TAGAGGGCTTCAAACTC 118963
|| | || | | || |||| || || ||| || || | || ||||| ||
Sbjct 175866 ACTTT---TTTAACAAACCTACCTTCTTGTTCATA-TTTCTGATATAATGCATCAAATTC 175921
Query 118964 TTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACC 119023
|| ||| || | | || || | | ||||| | || ||| | |
Sbjct 175922 ATCTCCCCAACAATCAGCCAAGCCAGGGCTGTCGTGAGGGCACATAAGGCTCCACTCCTC 175981
Query 119024 ACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCG 119083
| |||||||| ||||||||| || |||| |||||| || || |||| || || ||
Sbjct 175982 GTTGTTCTCAACCCTCTTCATGAATAGATCTGAGATCCACAGAGCATAGAACAGCTCTCG 176041
Query 119084 ACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 119143
||| |||| || | ||| || ||| || | || || | || || ||
Sbjct 176042 CGCGCGCACTTCCTCTTTGCCCGTGTTCTTCTTCAAGTCTAGGAACTCGAATATGTCAGC 176101
Query 119144 GTGCCACGGTTCCAGGTACACCGCGA------TTGACCCCTTACGACGACCAGCCTGGTT 119197
||||||||| || ||||| || |||| | || ||| | | || ||||||
Sbjct 176102 GTGCCACGGCTCGAGGTAGACGGCGAAGGCGCCGGGCCGCTT--GTTG-CCGCCCTGGTC 176158
Query 119198 TACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCC 119257
|| || | ||| ||| ||| | || || ||||| || | | || | ||| |||
Sbjct 176159 CACGTAGCGCGCCGTGTTGTTGTACACGCGCAGCATGGGCACCAGCCCGTTGGAGACGCC 176218
Query 119258 ATTTGT-CCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATA 119315
|| || ||| ||| || | | || || ||||||| || | || | || ||
Sbjct 176219 GTTCGTGCCCGCGATGTAGGTGCCT--TTCGCTCTGATGCAATGAACATGAACTCCTATG 176276
Query 119316 CCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATC 119375
|| || || | || || ||| || |||| | | ||| || ||||||| || |||||
Sbjct 176277 CCGCCCGCGGATTTGGATATTAATGCACACTGCTTCAGAGTGTCGTAGATACCTTCGATG 176336
Query 119376 GAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCAGCG 119435
||| |||| | ||||||||||| || || | ||||| | ||| || | ||
Sbjct 176337 CTGTCGTCCTTCATGGCGATGAGGAAACATGAGGAGAGCTGAGGGCGGGGGGTGGCGGCC 176396
Query 119436 TTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTGTCGTAGGTCTC 119494
||| || || || | ||||| |||| ||| | | ||| | | || ||||||
Sbjct 176397 GAGAACAGGGTGGGGCTGGCGTGCGTGAA-GTACTTCTCGGAGAGCAGGTTGTAGGTGGT 176455
Query 119495 CAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGT 119550
| | ||||| ||||| | ||||| || ||||| || |||||||| | |||||
Sbjct 176456 GATGGCGGCGTCGATGTCGGCGCCGTGGATGCCGATGGACACCCGCATCAGCATGT 176511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618421331590640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |