Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq486 203 4e-47
>seq486
Length=217039
Score = 203 bits (224), Expect = 4e-47
Identities = 1040/1635 (64%), Gaps = 30/1635 (2%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| ||||| | ||||| ||| ||||||| || || || | ||||| || | | |
Sbjct 176518 CCGCAGCACATGCTGATGCGGGTGTCCATCGGCATCCACGGCGCCGACATCGACGCCGCC 176459
Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
| || ||| || | | ||| | | ||| |||| ||||| | || ||||| ||
Sbjct 176458 ATCACCACCTACAACCTGCTCTCCGAGAAGTAC-TTCACGCACGCCAGCCCCACCCTGTT 176400
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
| || | || || | || || | ||| || ||||| ||||||| ||||| ||
Sbjct 176399 CTCGGCCGCCACCCCCCGCCCTCAGCTCTCCTCATGTTTCCTCATCGCCATGAAGGACGA 176340
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
| ||| | |||||||| | ||||| | | ||||||| ||| || || | || ||
Sbjct 176339 CAGCATCGAAGGTATCTACGACACTCTGAAGCAGTGTGCATTAATATCCAAATCCGCGGG 176280
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-ACA 104518
|| || || | || | ||| | ||||| || | | | || ||| ||| ||
Sbjct 176279 CGGCATAGGAGTTCATGTTCATTGCATCAGAGCGAA--AGGCACCTACATCGCGGGCACG 176222
Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578
|| || || | || | | || ||||| ||||| | ||| ||| ||||||||
Sbjct 176221 AACGGCGTCTCCAACGGGCTGGTGCCCATGCTGCGCGTGTACAACAACACGGCGCGCTAC 176162
Query 104579 GTAAATCAAGCTGGGCGTCGA-AAG------GGATCTATCGCAGTCTATCTTGAGCCATG 104631
|| | || ||||| | | ||| || | |||| ||||| || ||||| ||
Sbjct 176161 GTGGACCA----GGGCGGCAACAAGCGGCCCGGCGCCTTCGCCGTCTACCTCGAGCCGTG 176106
Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691
|||||| || || | |||||||| || ||| ||| || | ||||| | |||
Sbjct 176105 GCACGCTGACATATTCGAGTTCCTAGACTTGAAGAAGAACACGGGCAAAGAGGAAGTGCG 176046
Query 104692 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751
|| || || |||| ||||| ||||| ||||||| ||||||||||| |||||| |
Sbjct 176045 CGCGCGAGAGCTGTTCTATGCTCTGTGGATCTCAGATCTATTCATGAAGAGGGTTGAGAA 175986
Query 104752 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGG 104811
| | | ||| || | || || || | ||||| | | ||| |||
Sbjct 175985 CAACGAGGAGTGGAGCCTTATGTGCCCTCACGACAGCCCTGGCTTGGCTGATTGTTGGGG 175926
Query 104812 TGAGGAGTTTGAAGCCCTTTA-CACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGG 104870
|| || ||||| || | || || ||| || || |||||||| || | | |
Sbjct 175925 AGATGAATTTGATGCATTATATCAGAAA-TATGAACAAGAAGGTAGGTTTGTTAAAAAAG 175867
Query 104871 TGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 104929
| | ||| | || | ||||| |||||| | || | ||| |||||||| || |||
Sbjct 175866 TCCGCGCT-CAAATCCTATGGAAGGCTATTATTGAGGCACAAGTAGAGACTGGAACTCCA 175808
Query 104930 TACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 104989
||||||||||||||||| || || ||| |||||| ||||||||||||||||| |||
Sbjct 175807 TACATGCTTTACAAAGATGCATGCAACAGAAAGAGCAATCAAAAGAATTTGGGAACCATC 175748
Query 104990 AAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 105049
|| | |||||| || || || || | || | ||| ||||| |||||
Sbjct 175747 AAATGCAGCAATCTATGCACGGAGATTGTTGAGTACACATCTGCTGATGAAGTAGCTGTT 175688
Query 105050 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGAT 105109
|| ||| | || ||||| ||| || || || ||| | || || | || |||| ||||
Sbjct 175687 TGCAACTTGGCGTCAATTGCTGTCAACATGTTTGT--AACC-GAAAATAAAACATATGAT 175631
Query 105110 TATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGAT 105169
| ||| ||||| | |||| || |||| | || | ||||| |||| |||| |||
Sbjct 175630 TTTGAGAAACTAAAACAAGTGACCAAAATCATAACTGAGAACCTGAACAAGATTATCGAT 175571
Query 105170 AGAAATTTTTACCCCGT-TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 105228
|||| || ||||| ||| || || ||||| ||||| ||||| || || ||
Sbjct 175570 GTTAATTACTATCCCGTCCCAGA-AGCGAAAAAGTCTAACATGAGGCACCGACCTATCGG 175512
Query 105229 TCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGA 105288
| || || || ||||| || |||| || | | |||| | | || ||
Sbjct 175511 CATTGGCGTCCAAGGTCTGGCCGATGCTTTTGTATTGATGCGCCTTCCTTACGAGAGTGA 175452
Query 105289 CGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGC 105348
| ||| || | ||||| | |||||||| ||||| ||| | | ||| | || ||
Sbjct 175451 AGGAGCCCAGAAGCTCAATCAACAAATATTTGAAACCATCTATTATGGGGCTTTAGAAGC 175392
Query 105349 GAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTC 105408
|| | || |||| || || |||||||| | || |||| ||| ||
Sbjct 175391 TAGCTGTGAACTGGCCGAAAAACTCGGCGTTTATGAAACGTATGCTGGTTGTCCGGCCAG 175332
Query 105409 ACAAGGGGTGCTTCAATTTGATATGT-GGGAAGGTGAGACCAAGCTTCACTACGACTGGG 105467
|||| | | |||| ||| |||| ||||| | | ||| | | ||||||
Sbjct 175331 TGAAGGAATATTGCAATATGAAATGTGGGGAAAGACA-CCCACAGACCTGTGGGACTGGA 175273
Query 105468 AAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAA 105527
||||| ||| | ||| | | | || || || ||| ||| | |||| || |
Sbjct 175272 GTGCTCTGAAGCAGAAGATCGCGAAACATGGCCTGCGGAACTCTCTGTTGCTGGCCCCCA 175213
Query 105528 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGA 105587
|||| || |||||||| ||||| || | || || ||||||| ||||| || | |||
Sbjct 175212 TGCCCACCGCCTCCACTGCACAGATTCTTGGCAACAATGAATCATTTGAGCCATTCACTT 175153
Query 105588 CGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTCG 105647
| ||||| || | |||||| || | ||||| || | | |||||| | || ||
Sbjct 175152 CAAACATTTACCAAAGAAGAGTTCTTTCTGGAGAATTCCAGGTGGTCAACCATCACCTGC 175093
Query 105648 TGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAG 105707
| || |||| ||| || | | ||| | |||||||| ||||||| | |
Sbjct 175092 TTCGCGATCTCACCGAGGCTGATTTATGGGATGATGATATGAAAAATCTCATTATACACA 175033
Query 105708 CGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATGAAATTAAGA-AGTTGTACCGC 105766
||| |||||||| ||||| |||||| || |||| ||||| | | |||
Sbjct 175032 ACAATGGATCCATTCAGTCTATTGAAAGTATTCCCAAAGAAA-TAAGAGATCTTTACAAG 174974
Query 105767 ACAGTTTGGGAAATCAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTC 105826
|| || ||||| || ||||| || | |||||||| ||||||||| |||
Sbjct 174973 ACTGTGTGGGAGATATCTGTGAAGACCACAATCCAAATGGCCGCGGATCGTGGTGCTTTC 174914
Query 105827 ATTGATCAAAGTCAA 105841
||||| || ||||||
Sbjct 174913 ATTGACCAGAGTCAA 174899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583247720376560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |