Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq486 223 4e-53
>seq486
Length=217039
Score = 223 bits (246), Expect = 4e-53
Identities = 345/490 (70%), Gaps = 2/490 (0%)
Strand=Plus/Minus
Query 53267 AAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGAATCACCCTCAGATG 53326
|||||||| |||||||||| || ||||||||| || | || | ||||||| |
Sbjct 176431 AAGTACTTCACGCACGCCAGCCCCACCCTGTTCTCGGCCGCCACCCCCCGCCCTCAGCTC 176372
Query 53327 TCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCATCTACGAGACGCTC 53386
|| || ||||| | || |||||||| ||| ||||| || |||||||| || ||
Sbjct 176371 TCCTCATGTTTCCTCATCGCCATGAAGGACGACAGCATCGAAGGTATCTACGACACTCTG 176312
Query 53387 AAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCCACTGCTCGAA-CGT 53445
||| ||||||| || ||||| | |||| || || || | || || || | |
Sbjct 176311 AAGCAGTGTGCATTAATATCCAAATCCGCGGGCGGCATAGGAGTTCA-TGTTCATTGCAT 176253
Query 53446 CCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGATGGAATCGTGCCTAT 53505
| | ||||| ||||| ||| ||| |||||||||||| || | || | ||||| ||
Sbjct 176252 CAGAGCGAAAGGCACCTACATCGCGGGCACGAACGGCGTCTCCAACGGGCTGGTGCCCAT 176193
Query 53506 GCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGG 53565
||| ||||| | |||||||||||| || ||||| ||||||| || ||||| ||
Sbjct 176192 GCTGCGCGTGTACAACAACACGGCGCGCTACGTGGACCAGGGCGGCAACAAGCGGCCCGG 176133
Query 53566 GTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTGCG 53625
| |||||| |||||||||||||||||||||| ||||| | ||||| || || ||
Sbjct 176132 CGCCTTCGCCGTCTACCTCGAGCCGTGGCACGCTGACATATTCGAGTTCCTAGACTTGAA 176073
Query 53626 TCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTACAGCTCTGTGGATTCC 53685
||| ||| | || || ||||| || || ||||| ||||||||||| |
Sbjct 176072 GAAGAACACGGGCAAAGAGGAAGTGCGCGCGCGAGAGCTGTTCTATGCTCTGTGGATCTC 176013
Query 53686 GGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCTGATGTGCCCGAACGA 53745
|| || |||||| | | ||| ||||| ||||||||||| ||| |||||||| ||||
Sbjct 176012 AGATCTATTCATGAAGAGGGTTGAGAACAACGAGGAGTGGAGCCTTATGTGCCCTCACGA 175953
Query 53746 GTGCCCCGGC 53755
|||| |||
Sbjct 175952 CAGCCCTGGC 175943
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547203728681200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |