Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq197 122 5e-23
seq1030 96.9 2e-15
>seq197
Length=620651
Score = 122 bits (134), Expect = 5e-23
Identities = 162/220 (74%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|||||||| ||||| || ||||| ||| || || || ||||| ||||| | ||| ||
Sbjct 446715 AGACGCAATACCAAGTGAAGAGTCGACTCTTTCTGGATATTATAGTCTGACAATGTACGG 446774
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
||||||| |||||||||||||| || || | ||||| ||||| || || | || |||
Sbjct 446775 CCGTCTTCTAGTTGTTTACCGGCGAAGATAAGTCGCTGCTGGTCGGGAGGGATGCCTTCC 446834
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCT-TCGCTCTCCACTTCCACGG 34666
|||||| |||| || | || || | || |||||| ||| || ||||||| |
Sbjct 446835 TTGTCTTGGATC-TTGGCCTTCACATTCTCGATGGTGTCTGAAGCT-TCAACTTCCAGAG 446892
Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || || || || |||| |||||||| |||||||||||
Sbjct 446893 TGATTGTCTTGCCAGTTAGGGTTTTCACGAAAATCTGCAT 446932
Score = 116 bits (128), Expect = 2e-21
Identities = 161/220 (73%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|||||||| ||||| || || || ||| || || || ||||| || || | ||| ||
Sbjct 448872 AGACGCAATACCAAGTGAAGGGTTGACTCTTTCTGGATATTATAGTCAGACAATGTACGG 448931
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
||||||| |||||||||||||| || || | ||||| ||||| || || | || |||
Sbjct 448932 CCGTCTTCTAGTTGTTTACCGGCGAAGATAAGTCGCTGCTGGTCGGGAGGGATGCCTTCC 448991
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCT-TCGCTCTCCACTTCCACGG 34666
|||||| |||| || | || || | || |||||| ||| |||||||||| |
Sbjct 448992 TTGTCTTGGATC-TTGGCCTTCACATTCTCGATGGTGTCTGAAGCT-TCCACTTCCAGAG 449049
Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || || || || |||| |||||||| |||||||||||
Sbjct 449050 TGATTGTCTTGCCAGTTAGGGTTTTCACGAAAATCTGCAT 449089
Score = 116 bits (128), Expect = 2e-21
Identities = 164/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| ||||||| |||||| || || ||| ||| || || ||||| || || ||
Sbjct 449338 CCACCTCGCAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 449397
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | || || | ||||| || ||||| || || | ||| ||||| || ||
Sbjct 449398 AGGGTGCGGCCATCCTCCAACTGTTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGA 449457
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCAC 34658
| |||||| |||||| |||||| | || || | |||||||||| | |||||
Sbjct 449458 ATTCCCTCTTTGTCTTGGATCTTG-GCCTTCACATTCTCAATTGTGTCTGAGGCTTCCAC 449516
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| ||| || || || || || | |||||||| |||||||||||
Sbjct 449517 TTCCAGGGTAATTGTCTTGCCAGTCAGGGTTTTCACGAAAATCTGCAT 449564
Score = 116 bits (128), Expect = 2e-21
Identities = 167/233 (72%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| ||||||| |||||| || || ||| ||| || || ||||| || || ||
Sbjct 449566 CCACCTCGCAGACGCAGCACCAAGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 449625
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || || |||||||||| || || || || || || | |||||| ||||| |||||
Sbjct 449626 AAGGTGCGGCCGTCTTCAAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCGGGCGGG 449685
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTCGCTCTCCAC 34658
| ||||| ||||| |||||| | |||||| | || |||||| | ||| ||
Sbjct 449686 ATGCCCTCTTTGTCCTGGATCTTC-GCCTTAACGTTCTCGATGGTGTCTGCAGGCTCGAC 449744
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711
|||| || || ||||| || || | || ||||| || |||||||||||||
Sbjct 449745 CTCCAAAGTGATGGTTTTCCCAGTCAGGGTCTTCACGAATATCTGCATGTTGA 449797
Score = 107 bits (118), Expect = 1e-18
Identities = 159/220 (72%), Gaps = 4/220 (2%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|||||||| || | |||||| || |||||| |||||||| || || || | || ||
Sbjct 447659 AGACGCAAAACAAGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGACAAGGTGCGA 447718
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || |||||||| || || || | |||||||||||| || || | ||||||
Sbjct 447719 CCATCCTCCAGCTGTTTACCAGCGAAGATGAGACGCTGTTGGTCGGGAGGGATGCCCTCC 447778
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCT-TCGCTCTCCACTTCCACGG 34666
|||||| |||| || | || || | || |||||| ||| || ||||||| ||
Sbjct 447779 TTGTCTTGGATC-TTGGCCTTCACATTCTCGATGGTGTCTGAAGCT-TCAACTTCCAGGG 447836
Query 34667 TTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || || || || || | ||||| || |||||||||||
Sbjct 447837 TGATGGTCTTTCCTGTCAGAGTTTTGACGAAAATCTGCAT 447876
Score = 104 bits (114), Expect = 1e-17
Identities = 156/219 (71%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||||| ||||| || |||||| |||||| |||||||| || || || || || ||
Sbjct 447887 AGACGCAGTACCAAGTGAAGAGTGGACTCCTTCTGAATGTTGTAGTCGGATAGGGTGCGG 447946
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| ||||| ||||| || || || | |||||| ||||| || || | ||||||
Sbjct 447947 CCATCTTCTAGTTGCTTACCAGCGAAGATCAGACGCTGCTGGTCTGGGGGGATACCCTCC 448006
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTC-GCTCTCCACTTCCACGGT 34667
||||| |||||| |||| || ||||| ||| || ||||||| ||
Sbjct 448007 TTGTCCTGGATCTTGGCCTTTACATTCTCGATGGTGTCCGAAGCT-TCAACTTCCAGAGT 448065
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || | || ||||| |||||||||||
Sbjct 448066 GATGGTCTTTCCCGTCAGAGTCTTCACGAAAATCTGCAT 448104
Score = 102 bits (112), Expect = 5e-17
Identities = 163/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| |||||||| || | |||||| || || || || ||||| || || ||
Sbjct 447162 CCTCCTCGCAGACGCAAAACAAGATGGAGGGTAGATTCTTTCTGGATGTTGTAGTCGGAC 447221
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || || |||||||||| || || || ||||| || || | ||| ||||| || ||
Sbjct 447222 AAGGTGCGGCCGTCTTCAAGCTGCTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGA 447281
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAA-ATTGTGTCTTC-GCTCTCCA 34657
| |||||| |||||| |||||| | ||| || | || |||||| ||| || |
Sbjct 447282 ATTCCCTCTTTGTCTTGGATCTTG-GCTTTGACATTCTCGATGGTGTCTGAAGCT-TCAA 447339
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||||| || || || || || || | |||||||| |||||||||||
Sbjct 447340 CTTCCAGAGTGATGGTCTTGCCAGTCAGGGTTTTCACGAAAATCTGCAT 447388
Score = 98.7 bits (108), Expect = 6e-16
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|||||||| ||||| || || || ||| || || || ||||| || || | ||| ||
Sbjct 447399 AGACGCAATACCAAGTGAAGGGTTGACTCTTTCTGGATATTATAGTCAGACAATGTACGG 447458
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
||||||| |||||||||||||| || || | ||||| ||||| || || | ||||||
Sbjct 447459 CCGTCTTCTAGTTGTTTACCGGCGAAGATAAGTCGCTGCTGGTCGGGAGGGATGCCCTCC 447518
Query 34609 TTGTCTGTGATCTT 34622
|||||| ||||||
Sbjct 447519 TTGTCTTGGATCTT 447532
Score = 98.7 bits (108), Expect = 6e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| || || || || | ||| || || |||||| || ||||| || || ||
Sbjct 448106 CCTCCTCGGAGTCGTAAAACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAT 448165
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || || ||||||| || || ||||| || || || | |||||| |||||||| ||
Sbjct 448166 AAGGTGCGGCCGTCTTCTAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGAGGA 448225
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTC-GCTCTCCAC 34658
| || ||||||||| |||||| |||| || |||||| ||| || ||
Sbjct 448226 ATGCCTTCCTTGTCTTGGATCTTAGCCTTTACATTCTCGATGGTGTCTGAAGCT-TCGAC 448284
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||||| ||| || || || || || | |||||||| |||||||||||
Sbjct 448285 TTCCAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACGAAAATCTGCAT 448332
Score = 96.9 bits (106), Expect = 2e-15
Identities = 163/238 (68%), Gaps = 21/238 (9%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|||||||| ||||| || || || ||| || || || ||||| || || | ||| ||
Sbjct 449100 AGACGCAATACCAAGTGAAGGGTTGACTCTTTCTGGATATTATAGTCAGACAATGTACGG 449159
Query 34549 TCGTCTTCAAGTTGTTTACCGGC-------------------AAATATTAAACGCTGTTG 34589
||||||| |||||||||||||| ||| || || | ||| ||
Sbjct 449160 CCGTCTTCTAGTTGTTTACCGGCGATCTAACTGTTTGCCTGCAAAGATCAACCTCTGCTG 449219
Query 34590 GTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTT 34648
||| || || | |||||| |||||| |||||| | || || | ||||||||||
Sbjct 449220 GTCTGGGGGAATTCCCTCTTTGTCTTGGATCTTG-GCCTTCACATTCTCAATTGTGTCTG 449278
Query 34649 CGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| |||||||||| ||| || || || || || | |||||||| |||||||||||
Sbjct 449279 AGGCTTCCACTTCCAGGGTAATTGTCTTGCCAGTCAGGGTTTTCACGAAAATCTGCAT 449336
Score = 95.1 bits (104), Expect = 8e-15
Identities = 154/219 (70%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| || ||||| || || ||| ||||||||| ||||| || || || | || ||
Sbjct 446259 AGACGTAATACCAAGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGA 446318
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || || || ||||||||||| || || | |||||| ||||| || || | ||||||
Sbjct 446319 CCATCCTCCAGCTGTTTACCGGCGAAGATGAGACGCTGCTGGTCTGGGGGAATACCCTCC 446378
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTC-GCTCTCCACTTCCACGGT 34667
||||| |||||| |||| || ||||| ||| || ||||||| ||
Sbjct 446379 TTGTCCTGGATCTTGGCCTTTACATTCTCGATGGTGTCCGAAGCT-TCAACTTCCAGAGT 446437
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| || || || || | || ||||| |||||||||||
Sbjct 446438 GATGGTCTTTCCCGTCAGAGTCTTCACGAAAATCTGCAT 446476
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| || || || || | ||| || || |||||| || ||||| || || ||
Sbjct 446478 CCTCCTCGGAGTCGTAAAACAAGATGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAT 446537
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| || || ||||||| || || ||||| || || || | |||||| |||||||| ||
Sbjct 446538 AAGGTGCGGCCGTCTTCTAGCTGCTTACCAGCGAAGATCAGACGCTGCTGGTCCGGAGGA 446597
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTC-GCTCTCCAC 34658
| || ||||||||| |||||| |||| || |||||| ||| || ||
Sbjct 446598 ATGCCTTCCTTGTCTTGGATCTTAGCCTTTACATTCTCGATGGTGTCTGAAGCT-TCGAC 446656
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | ||| || || || || || | |||||||| |||||||||||
Sbjct 446657 TTCTAGGGTGATGGTCTTGCCAGTCAGGGTTTTCACGAAAATCTGCAT 446704
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||| ||||| | ||||| || |||||| ||| || |||||||| || || ||
Sbjct 446934 CCACCTCGCAGACGAAGTACCAAGTGAAGAGTGGACTCTTTCTGAATGTTGTAGTCAGAC 446993
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | ||||| | || ||||| || || || | |||||| ||||| || ||
Sbjct 446994 AGGGTGCGGCCATCTTCCAACTGCTTACCAGCGAAGATCAGACGCTGCTGGTCTGGAGGG 447053
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || | |||||| | || || || | ||| ||
Sbjct 447054 ATGCCCTCCTTGTCCTGGATC-TTAGCTTTAACATTCTCGATAGTATCGGCTGGCTCGAC 447112
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | || || |||||||| || | || || || |||||||||||
Sbjct 447113 CTCAAGAGTGATAGTTTTACCAGTAAGAGTCTTGACGAAAATCTGCAT 447160
>seq1030
Length=27445
Score = 96.9 bits (106), Expect = 2e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| |||||||| | ||||||||| || || || ||||| || ||||| || || ||
Sbjct 2674 CCTCCTCTAAGCCTCAACACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAGTCGGAC 2733
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | || || || |||||||| || || || | ||||| |||||||| ||
Sbjct 2734 AGGGTACGGCCATCCTCCAGCTGTTTACCAGCGAAGATCAGTCGCTGCTGGTCCGGGGGG 2793
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659
| ||||||||||| |||||| ||| | | || ||||| ||||||
Sbjct 2794 ATACCCTCCTTGTCCTGGATCTTGGCTTTGACATTTTCGATGGTGTCGGAAGCCTCCACC 2853
Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTG 34710
|| | ||| || || || || || | || ||||| || |||||||| |||
Sbjct 2854 TCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTCACGAAGATCTGCATATTG 2904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314722718634002
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