Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq197 154 1e-32
seq270 95.1 1e-14
>seq197
Length=620651
Score = 154 bits (170), Expect = 1e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||||||||| || ||| | || || || ||||| ||| | ||
Sbjct 447876 ATGCAGATTTTCGTCAAAACTCTGACAGGAAAGACCATCACCCTGGAAGTTGAAGCTTCA 447817
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || |||| || || || || |||||||| || ||||| || ||||| |||
Sbjct 447816 GACACCATCGAGAATGTGAAGGCCAAGATCCAAGACAAGGAGGGCATCCCTCCCGACCAA 447757
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| || ||||| |||| || || ||| | ||||| ||||||
Sbjct 447756 CAGCGTCTCATCTTCGCTGGTAAACAGCTGGAGGATGGTCGCACCTTGTCCGACTACAAC 447697
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||| ||| | ||| | ||||||||| |||| || || ||
Sbjct 447696 ATTCAGAAGGAGTCTACCCTCCATCTTGTTTTGCGTCTGCGCGGAGGTAT 447647
Score = 152 bits (168), Expect = 4e-32
Identities = 168/224 (75%), Gaps = 0/224 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || |||||||| || ||| | || ||||| ||||| ||| | ||
Sbjct 448589 ATGCAGATCTTTGTCAAGACTCTGACGGGAAAGACCATCACTCTGGAAGTTGAAGCTTCA 448530
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| ||||||| |||||| || || ||||||||||| || || || || || ||
Sbjct 448529 GACATCATTGAGAATGTCAAAGCCAAGATCCAAGACAAAGAGGGAATTCCCCCAGACCAG 448470
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | ||||||||| || | || || || ||| | ||||| ||||||
Sbjct 448469 CAGAGGTTGATCTTCGCCGGCAACCAGCTAGAGGATGGTCGCACCTTGTCCGACTACAAC 448410
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGG 27211
||||| |||||||| ||| | ||| | ||||||||| |||| ||
Sbjct 448409 ATTCAGAAGGAGTCTACCCTCCATCTTGTTTTGCGTCTGCGTGG 448366
Score = 140 bits (154), Expect = 3e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| ||||| |||||| | ||||| || ||||||||| | ||
Sbjct 449564 ATGCAGATTTTCGTGAAAACCCTGACTGGCAAGACAATTACCCTGGAAGTGGAAGCCTCA 449505
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| || || || || ||||||||||| || || || || || ||
Sbjct 449504 GACACAATTGAGAATGTGAAGGCCAAGATCCAAGACAAAGAGGGAATTCCCCCAGACCAG 449445
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | || |||||||| ||||| || | ||| | || || ||||||
Sbjct 449444 CAGAGGTTGATCTTTGCAGGCAAACAGTTGGAGGATGGCCGCACCCTGTCTGACTACAAC 449385
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || ||||| ||| | || ||||| ||||| |||| ||||| ||
Sbjct 449384 ATCCAGAAAGAGTCCACCCTGCACTTGGTGCTGCGTCTGCGAGGTGGTAT 449335
Score = 138 bits (152), Expect = 1e-27
Identities = 168/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || |||||||| || ||| | || ||||| ||||| ||| | ||
Sbjct 446476 ATGCAGATTTTCGTGAAGACTCTGACGGGAAAGACCATCACTCTGGAAGTTGAAGCTTCG 446417
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || |||| || || || || || ||||| || || || || || || ||
Sbjct 446416 GACACCATCGAGAATGTAAAGGCCAAGATCCAGGACAAGGAGGGTATTCCCCCAGACCAG 446357
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | |||||| ||||| |||| || || ||| | ||||| ||||||
Sbjct 446356 CAGCGTCTCATCTTCGCCGGTAAACAGCTGGAGGATGGTCGCACCTTGTCCGACTACAAC 446297
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216
|| ||||||||||| ||| | || ||||| || ||| | || |||||||
Sbjct 446296 ATCCAAAAGGAGTCCACCCTTCACTTGGTATTACGTCTCCGTGGTGGCA 446248
Score = 136 bits (150), Expect = 3e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| ||||| |||||| | || ||||| ||||| ||| | ||
Sbjct 447388 ATGCAGATTTTCGTGAAAACCCTGACTGGCAAGACCATCACTCTGGAAGTTGAAGCTTCA 447329
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || |||| |||||| || || ||||||||||| || || || || || ||
Sbjct 447328 GACACCATCGAGAATGTCAAAGCCAAGATCCAAGACAAAGAGGGAATTCCCCCAGACCAG 447269
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||| | || || | || ||||| || | |||||| | ||| | ||||| ||||||
Sbjct 447268 CAGAGGTTGATCTTTGCAGGCAAGCAGCTTGAAGACGGCCGCACCTTGTCCGACTACAAC 447209
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || || || || ||| | ||| | ||||||||| |||| || || ||
Sbjct 447208 ATCCAGAAAGAATCTACCCTCCATCTTGTTTTGCGTCTGCGAGGAGGTAT 447159
Score = 123 bits (136), Expect = 2e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
|||||||||||| || || || ||||| || || | || ||| | || || || || |
Sbjct 449793 CATGCAGATATTCGTGAAGACCCTGACTGGGAAAACCATCACTTTGGAGGTCGAGCCTGC 449734
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || |||| || || || || || |||||||| ||||| || ||||| ||
Sbjct 449733 AGACACCATCGAGAACGTTAAGGCGAAGATCCAGGACAAAGAGGGCATCCCGCCCGACCA 449674
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | ||| ||||| || | |||||| | ||| | ||||| |||||
Sbjct 449673 GCAGCGTCTCATCTTCGCTGGCAAGCAGCTTGAAGACGGCCGCACCTTGTCCGACTACAA 449614
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||| || || ||||| ||| | || ||||| ||||| |||| ||||| ||
Sbjct 449613 CATCCAGAAAGAGTCCACCCTGCACTTGGTGCTGCGTCTGCGAGGTGGTAT 449563
Score = 122 bits (134), Expect = 8e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || |||||||| || ||| | || ||||| ||||| ||| | ||
Sbjct 448104 ATGCAGATTTTCGTGAAGACTCTGACGGGAAAGACCATCACTCTGGAAGTTGAAGCTTCG 448045
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || |||| || || || || || ||||| || || || || || || ||
Sbjct 448044 GACACCATCGAGAATGTAAAGGCCAAGATCCAGGACAAGGAGGGTATCCCCCCAGACCAG 447985
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| || || ||| | ||||| | ||| | ||||| ||||||
Sbjct 447984 CAGCGTCTGATCTTCGCTGGTAAGCAACTAGAAGATGGCCGCACCCTATCCGACTACAAC 447925
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| |||||||| || | || ||||| ||||| |||| || || ||
Sbjct 447924 ATTCAGAAGGAGTCCACTCTTCACTTGGTACTGCGTCTGCGCGGAGGTAT 447875
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||| || || || |||| |||||||| || || || ||
Sbjct 447160 ATGCAGATTTTCGTCAAGACTCTTACTGGTAAAACTATCACTCTTGAGGTCGAGCCAGCC 447101
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
|| | || |||| || ||| || || || ||||| || ||||| || || || ||
Sbjct 447100 GATACTATCGAGAATGTTAAAGCTAAGATCCAGGACAAGGAGGGCATCCCTCCAGACCAG 447041
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
|||||| | || | ||| || || || |||||||| | ||| | || || ||||||
Sbjct 447040 CAGCGTCTGATCTTCGCTGGTAAGCAGTTGGAAGATGGCCGCACCCTGTCTGACTACAAC 446981
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| || ||||| || | || ||||| | ||| |||| ||||| ||
Sbjct 446980 ATTCAGAAAGAGTCCACTCTTCACTTGGTACTTCGTCTGCGAGGTGGTAT 446931
Score = 107 bits (118), Expect = 2e-18
Identities = 106/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||||||||| || ||| | || ||||| ||||| ||| | ||
Sbjct 448861 ATGCAGATTTTCGTGAAAACTCTGACGGGAAAGACCATCACTCTGGAAGTTGAAGCTTCA 448802
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| |||||| || || |||||||| || ||||| || ||||| |||
Sbjct 448801 GACACCATTGAGAATGTCAAAGCCAAGATCCAAGACAAGGAGGGCATCCCTCCCGACCAA 448742
Query 27108 CAGCGTTTAATATACGC 27124
|||||| | || | |||
Sbjct 448741 CAGCGTCTCATCTTCGC 448725
Score = 102 bits (112), Expect = 7e-17
Identities = 169/249 (68%), Gaps = 19/249 (8%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || ||||| ||||| |||||| | ||||| || ||||||||| | ||
Sbjct 449336 ATGCAGATTTTCGTGAAAACCCTGACTGGCAAGACAATTACCCTGGAAGTGGAAGCCTCA 449277
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||||| || || || || ||||||||||| || || || || || ||
Sbjct 449276 GACACAATTGAGAATGTGAAGGCCAAGATCCAAGACAAAGAGGGAATTCCCCCAGACCAG 449217
Query 27108 CAGCGTTTAATAT-------------------ACGCCGGCAAACAATTGGAAGACAGTTC 27148
||| | || || | |||||| |||||| | |||||| |
Sbjct 449216 CAGAGGTTGATCTTTGCAGGCAAACAGTTAGATCGCCGGTAAACAACTAGAAGACGGCCG 449157
Query 27149 GACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCG 27208
|| | || || || || || || || ||||| ||| | || ||||| |||||| ||||
Sbjct 449156 TACATTGTCTGACTATAATATCCAGAAAGAGTCAACCCTTCACTTGGTATTGCGTCTGCG 449097
Query 27209 GGGTGGCAT 27217
||||| ||
Sbjct 449096 TGGTGGTAT 449088
>seq270
Length=486759
Score = 95.1 bits (104), Expect = 1e-14
Identities = 129/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 49240 ATGACGCCTGTCACGCCTATGTTGGCGGACGTGTGCAAATCCATGTCAACGGCGATGAAA 49299
||||| || || ||| ||||| || || | ||||| ||| | || ||| |||||
Sbjct 121694 ATGACACCAGTTCTGCCGATGTTAGCCGAAGCATGCAAGTCCGTTGAAATGGCAATGAAG 121635
Query 49300 AAGTGTCCCGACGGAATGTTGGCGGAAATTAAATATGACGGCGAACGTGTGCAAATTCAC 49359
|| ||||| | |||||||| | |||||||||||||| || ||| | || ||| | |||
Sbjct 121634 AAATGTCCTAATGGAATGTTCTCTGAAATTAAATATGATGGTGAAAGAGTCCAAGTACAC 121575
Query 49360 AAAAAGCGCGAGCGTTTTCAATTCTATTCAAGATCTTTAAAGTCTGTGAGCGCACATAAA 49419
|| ||| | | ||| | | || ||||||||| || || |||||| |||||||||
Sbjct 121574 AAGAAGGGGCATGAATTTAAGTACTTTTCAAGATCATTGAAACCTGTGATGGCACATAAA 121515
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434908646954880
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