Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_028656.1
Length=65955
Score E
Sequences producing significant alignments: (Bits) Value
seq996 801 0.0
seq997 306 2e-78
>seq996
Length=29639
Score = 801 bits (888), Expect = 0.0
Identities = 785/1004 (78%), Gaps = 26/1004 (3%)
Strand=Plus/Minus
Query 64921 TCATTATATCCATTTAACTAAGAGGACAATGCGGCATGAGTATACCCGCTAATGG-ACTG 64979
|| ||||||||||||||||||| |||| | |||||| ||||||| | | || | |||
Sbjct 20568 TCGTTATATCCATTTAACTAAGGGGACGAGGCGGCACGAGTATAGC-GTTATTTACACTT 20510
Query 64980 CGGGGTAAGTACGCTGCCGCTCGATTGCTTAAACCCTCGCCATTTATGCCGGGTTTTTAT 65039
| | |||| | ||||| || |||| ||| || ||||| | ||| ||||
Sbjct 20509 TGCGTTAAGCGCATCGCCGCCTGACTGCTCAAAGAGTCACCATTCAGCCCG---TTTT-- 20455
Query 65040 CATTTTTCTTAATGTTTTCCGCACGTTCTGCTT-----TTTGGCGTGCTTCTGCTTTGCG 65094
|||| | |||| | | | | |||| ||| ||| || || ||||||||
Sbjct 20454 --TTTTGCCTAAT----TGCCCTCATTCT-CTTGCGCCTTTAGC-----TCAGCTTTGCG 20407
Query 65095 CTTGTTGCTCATGTCGTTACGGATCTGTGCATGACTCATTAACGCGAAGATAAAGGTGCC 65154
||||| ||||||||||||||| |||||||| || | | |||||||||||| || ||
Sbjct 20406 TTTGTTAGACATGTCGTTACGGATTTGTGCATGGCTTAACAGCGCGAAGATAAACGTTCC 20347
Query 65155 GCCGCAGATGTTCCCCGCTAAAGTAGGTAGTGCGAAGGGCCAGATGAAATCGCTCCAGTG 65214
||||||||| ||||| || | || || || ||||| ||||||| ||||| ||||||||
Sbjct 20346 GCCGCAGATATTCCCGGCCAGCGTCGGAAGGGCGAACGGCCAGAAAAAATCACTCCAGTG 20287
Query 65215 CAGCGTACCGTTAAACACCAGATAGAGGATTTCAACAGAACCGACAACGATGTGAGTGGT 65274
|||||||| ||||| ||||||||||| |||||||| | |||||| || || || |||||
Sbjct 20286 AAGCGTACCATTAAAGACCAGATAGAGTATTTCAACGGTACCGACCACAATATGCGTGGT 20227
Query 65275 GTCACCCAGGGCAATAAGCCAGGTCATCAATATAATCACCACAATCTTTGCCGCACCC-G 65333
||| |||||||||| ||||||||||||| ||| ||||||||||| |||| ||| || |
Sbjct 20226 GTCCGCCAGGGCAATCAGCCAGGTCATCAGTATGATCACCACAAT-TTTGGCGCTGCCTG 20168
Query 65334 CTGCAGGAAACATCCATACCATAGTGGCGATCAGCCAGCCGGAAATGATCGCGTTGGCAA 65393
| | |||||||||||| ||||| |||||||| | ||||||||| ||||| ||||| || |
Sbjct 20167 CAGAAGGAAACATCCACACCATCGTGGCGATAATCCAGCCGGAGATGATGGCGTTTGCGA 20108
Query 65394 ACATCTCGCTGGGGGTGTTCTTCATCACATCCATGCCGATTTTGACAAATGCATCGCGAG 65453
|||| ||| || ||||| |||||||| |||||||| ||||| ||||| ||||| || |
Sbjct 20107 ACATTTCGGCCGGCGTGTTTTTCATCACGTCCATGCCAATTTTCACAAACGCATCCCGGG 20048
Query 65454 TTTCTTCATTGAAGATTGGCATATATTCAAATGCCCACGCCGCAATACCTGTCCCGAGAA 65513
| ||||| ||||| |||||||||||||| ||||| || || ||||| || || | ||
Sbjct 20047 TAGGTTCATCAAAGATCGGCATATATTCAAACGCCCAGGCGGCGATACCCGTGCCTATAA 19988
Query 65514 TATTACCCAGCAGCACGACGCCCCATAACCGCATAAGTAAGCCAACGTTGCTCATTGTCG 65573
| ||||||||||| || |||||||| || |||| | ||| || | |||| | || |
Sbjct 19987 TGTTACCCAGCAGGACCACGCCCCACAAACGCAACAATAAACCGAAATTGCCGAGGGTTG 19928
Query 65574 GTTTTTGCATGACGGGTAGTACCGCAGTCACGGTGTTTTCGGTAAATAATTGCTGGCGGG 65633
| |||||||| || || || || |||||||| |||||||| ||||| | ||||||||||
Sbjct 19927 GATTTTGCATCACTGGCAGAACGGCAGTCACCGTGTTTTCAGTAAACAGCTGCTGGCGGG 19868
Query 65634 CCATAATGACGATAATAAAACCAAAGGTATAACCGAGATTCTCCAGCAAGAAGCTGCCCG 65693
|||| ||||| |||||||| || |||||||| ||||| |||||||| || || | ||| |
Sbjct 19867 CCATGATGACAATAATAAAGCCGAAGGTATAGCCGAGGTTCTCCAGTAAAAAACCGCCGG 19808
Query 65694 GCACACCTTCCAGTTCGACATGAAATATCCCTTTTGCCAGTAATGAAGCGCCCATCGACA 65753
| ||||| || |||| |||||||||||||||||||| || | ||| |||||||| ||||
Sbjct 19807 GGACACCCTCAAGTTGAACATGAAATATCCCTTTTGCGAGCAGTGACGCGCCCATTGACA 19748
Query 65754 GACCCGCCGCAATGGCTGACCACAGTAGTGCCATTGCGTCGCGTTCCAGCTCTTTTTCAC 65813
| ||||| || ||||||||||| | || ||||| || ||||| |||| ||| ||||| |
Sbjct 19747 GTCCCGCAGCGATGGCTGACCAGAAGAGGGCCATGGCATCGCGCTCCATCTCCTTTTCGC 19688
Query 65814 CATCCTGGCGGATATGCTCATGAATTGCCATCGCCCGGGAGGGGAGTCGATCTTCATCTA 65873
|||||||||| ||||| || |||||||||||||| ||||||||||| ||||||||||| |
Sbjct 19687 CATCCTGGCGTATATGTTCGTGAATTGCCATCGCGCGGGAGGGGAGGCGATCTTCATCAA 19628
Query 65874 TTTCTAtttttttGCCACGCTCTTTTTCTTCGCTCTCAACTTCA 65917
|||||| || | ||| ||| |||| || |||||||||| ||||
Sbjct 19627 CTTCTATCTTCTCGCCGCGCGCTTTCTCCTCGCTCTCAATTTCA 19584
Score = 122 bits (134), Expect = 4e-23
Identities = 70/72 (97%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 1323 TGTCCCCTGCAGGAATCGAACCTGCAATTAGCCCTTAGGAGGGGCTCGTTATATCCATTT 1382
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 20613 TGTCCCCTGCAGGAATCGAACCTGCAACTAGCCCTTAGGAGGGGCTCGTTATATCCATTT 20554
Query 1383 AACTAAGAGGAC 1394
||||||| ||||
Sbjct 20553 AACTAAGGGGAC 20542
>seq997
Length=29618
Score = 306 bits (338), Expect = 2e-78
Identities = 374/508 (74%), Gaps = 13/508 (3%)
Strand=Plus/Minus
Query 32117 CTGCCGTTCTGGCGCTG--ATTGCCGCAGGTGCTTCTGCGCCTGAAATCCTCGACCAGTT 32174
|||| ||||||| |||| |||| || |||||| |||| | | ||| ||||| |||||
Sbjct 20900 CTGCAGTTCTGGGGCTGGTATTG--GCTGGTGCTCCTGCATCCGTAATTCTCGATCAGTT 20843
Query 32175 TCTGGATGAAAAGGAAGGTAACCACACCACGGCATACCGTGATGGTGCGGGTATCTGGAC 32234
|||| ||||||| || |||||| | |||||| ||| ||||||| ||||| |||||
Sbjct 20842 TCTGAATGAAAAAGAGGGTAACAGCCTCACGGCCTACAAAGATGGTGGTGGTATTTGGAC 20783
Query 32235 CATCTGCCGTGGAGCCACCCGGGTGGATGGTAAGCCTGTGATTCCTGGCATGAAGCTGTC 32294
|| ||||| || || || ||| ||| |||| || || | | |||||||| || |
Sbjct 20782 TATTTGCCGCGGCGCAACGATGGTTGATCGTAAACCGGTTGTGCAGGGCATGAAATTGAC 20723
Query 32295 GAAGGAAAAATGCGACCGGGTTAACGCTATCGAACGGGATAAGGCGCTGGCATGGGTGGA 32354
||| |||||| | | ||| || ||||||||||| ||||||| ||||||||||| ||
Sbjct 20722 ACAGGCCAAATGCAATCTGGTGAATGCTATCGAACGCAATAAGGCTCTGGCATGGGTTGA 20663
Query 32355 GCGTAATATAAAAGTTCCACTGACCGAGCCACAAAAAGCAGGTATCGCGTCATTTTGCCC 32414
|| ||||| || || || ||||| || || ||||| || ||||| || || || ||
Sbjct 20662 CCGCAATATTTCGGTACCGCTTACCGAACCGCAGAAAGCTGGAATCGCATCTTTCTGTCC 20603
Query 32415 CTATAACATTGGCCCCGGTAAGTGTTTCCCGTCGACGTTTTATAAGCGGCTTAATGCAGG 32474
|| ||||| || || |||||||| |||||||| ||||| |||||||| | ||||| ||
Sbjct 20602 GTACAACATCGGGCCGGGTAAGTGCTTCCCGTCAACGTTCTATAAGCGCATCAATGCCGG 20543
Query 32475 CGATCGCAGGGGAGCGTGTGAGGCGATTCGCTGGTGGATTAAGGACGGTGGCAGAGACTG 32534
|| ||| || || || ||||| |||||||||||||||| |||| |||| | |||||
Sbjct 20542 TGACCGCCCCGGGGCATGCGAGGCAATTCGCTGGTGGATTAGAGACGCTGGCCGCGACTG 20483
Query 32535 CCG------TA---TCCGTTCAAACAACTGTTACGGTCAGGTATCAAGACGTGACCAGGA 32585
||| || || ||| ||| |||||||||||| | | || ||||||||
Sbjct 20482 CCGCCTGACTAAAGGCCAGAAGAACGGCTGCTACGGTCAGGTAGAACGGCGAGACCAGGA 20423
Query 32586 GAGTGCGCTGGCATGCTGGGGTATCGAC 32613
||||| |||| |||||||| || |||
Sbjct 20422 AAGTGCTTTGGCGTGCTGGGGGATAGAC 20395
Score = 158 bits (174), Expect = 5e-34
Identities = 239/336 (71%), Gaps = 18/336 (5%)
Strand=Plus/Minus
Query 35002 AATCATTACCGCGATAACGCCATAACCTACAAAGAGCAGCGCGATAAAAAAGTCAGTGAG 35061
|| || || ||||| |||||||| |||||||||||||||||||||||| | || ||||
Sbjct 18185 AACCACTATCGCGACAACGCCATCACCTACAAAGAGCAGCGCGATAAA---GCCACTGAG 18129
Query 35062 ---CTGGAGCTGGCAAATGCAACCATTACTGATATGCAGCAGCGCCAGCGTGATGTTGCT 35118
|| | ||| || || ||||| | || |||||| ||||||||||||| |||
Sbjct 18128 AAACTCAGCCAGGCCAACGCCACCATCAAAGACATGCAGACCCGCCAGCGTGATGCCGCT 18069
Query 35119 GCACTTGATGCCAGATACTCGAGGGAATTAGCCGATGCGAGAGCTGAAAATGAAACTCTT 35178
|| || ||||||| |||| | | ||| || ||||||| || | | ||| |||
Sbjct 18068 GCGCTGGATGCCAAATACACTGGAGAACCGGCTGATGCGAAAGATATCATTGAGCGTCTG 18009
Query 35179 C---GCGCTGACGTTGCCGCTGGTTACCGCAGCCTGCGGATCAACGCCACCTGTCCAGGT 35235
| ||| || | |||| | || | || |||| | ||||||| | |||||| |
Sbjct 18008 CATAGCGATGTCATTGCTGGCCGTAAGCGG---CTGCAGCTCAACGCAAACTGTCCCG-- 17954
Query 35236 CCCGTGCGTGAAGCCACCGGCACCGCCCGCGTGGATAATGCAACCGGCCCCCGACTGGCA 35295
|| || ||| |||||||||| | || ||| |||| |||||||| |||| |
Sbjct 17953 --CGAACGG--AGCGACCGGCACCGGCGGCATGGGCGATGCTTCCGGCCCCAGACTTACT 17898
Query 35296 GACACCGCTGAACGGGATTATTTCACCCTCAGAGAG 35331
||| ||||||||||||||||||||| ||||||| ||
Sbjct 17897 GACTCCGCTGAACGGGATTATTTCATCCTCAGAAAG 17862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 210926588121144
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |