Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_028657.1
Length=60919
Score E
Sequences producing significant alignments: (Bits) Value
seq960 242 1e-59
seq813 111 6e-20
>seq960
Length=33163
Score = 242 bits (268), Expect = 1e-59
Identities = 765/1165 (66%), Gaps = 29/1165 (2%)
Strand=Plus/Minus
Query 23631 TCCTGGCTGTTGGTTAGGATCGCCCATTTTCCGCGCCGCTGGGCCTCACTCTCGCGGGTG 23690
||| ||| |||||| || | ||||||||| ||| |||||||||| || | ||||
Sbjct 13674 TCCAGGCGGTTGGTCAGCAGCGCCCATTTGCCGATGCGCTGGGCCTGGGCCTGGGAGGTG 13615
Query 23691 CAGCCAATGGCTGCCACCTCGACCGGGTTGTCGCCGTAACGC-CGCTGCAGGCGCTTATC 23749
||||| |||| | | |||| | | | |||| ||||| || ||| | | |||
Sbjct 13614 CAGCCGGTGGCGGTGATCTCGGTCTGCTGCACGCCATAACGGGCGATGCCTTC-CGGATC 13556
Query 23750 GGTGGCC-ACAGCCACGTCGGTGTCG-TAGTTGTTCGCCGGATTGTCGTAGCTGACCAAG 23807
| | | || || | || || || ||| || |||||| | || |||| |||| |
Sbjct 13555 GTCGACGTACTGCACCTTC--TGCCGGTAGAAGTCCGCCGGGTCGTTCCAGCTCACCAGG 13498
Query 23808 GCACGGCTGTAGCGAGTGCGCTCACTGGCCGAGCC---GTAGCTGAAGCGGCCGTCGATG 23864
|| ||||||||| || || | |||||||| |||| ||| |||||||||
Sbjct 13497 GCCACGCTGTAGCGGGT---CTTTTTCGCCGAGCCACCGTAGACGAACTTGCCGTCGATC 13441
Query 23865 ACATTGGCCCTGGTGTAGGCGAAATCGACGTCGGTGGCGCGCGGGATATCCGCCTGGATC 23924
|| ||||| || |||||| | | | ||| | | ||| || || ||| |
Sbjct 13440 ACGTTGGCGTTGCTGTAGGTGTACAC-----CGG-GTCTTCCGGCATGTCGGCCACCGCC 13387
Query 23925 TTCAGTTGGCCCTGGGCCCAGTACGCCATACCACGGTAGATAGCGGTGAGGTCGCGCAGC 23984
||| ||| | |||| || ||||| || ||| || | | || ||||| |||||
Sbjct 13386 ATCACCGAGCCTGCGCCCCAATAGGCCATGCCGCGGAAGGTGGTGGCCAGGTCCTGCAGC 13327
Query 23985 AGCTCCCAG-GCCCCGGCGCGGCTTTGCAGGTTCAGGTTGCAGGTGTGTCGCGGCTCCTG 24043
| || ||| || ||||||| || | ||||||||||| ||||||||
Sbjct 13326 A-CTTTCAGCGCATCGGCGCGCACCGAGAGATAGAGGTTGCAGGTAAAGCGCGGCTCGGT 13268
Query 24044 GCCACCCTTCCCATCCGGCACCAACTGGTCGCAGTACTGGGAAATCCGGTACATCTCCCA 24103
||| ||||| ||||| | |||| |||||||||||||||| || ||||||| ||||||
Sbjct 13267 GCCGCCCTTGCCATCGGACACCGGCTGGTCGCAGTACTGGCCGATGCGGTACAGCTCCCA 13208
Query 24104 GCGATCGACCATCCAAGCCTTGATGCGTTTACCCACACCGAAGCGATCGTTGGTCACGAT 24163
|| ||| || |||| | | || | || | || | || || |
Sbjct 13207 CTTGTCCACCTGGGCGGCGTTGAGCAGGTGCCCGAGGCCATAACGCTGGTGCAGCAGCAG 13148
Query 24164 GTCGTAGGTGTGCCAGACCGGGTTGTCGGTCCAGGCCTGTTTCATCGTGCCGTCCCAGAT 24223
||||||| | |||| |||||||||||||||||||| || | ||||||||||| |
Sbjct 13147 GTCGTAGTAGATCCAGGCCGGGTTGTCGGTCCAGGCCGACTTGAAGGTGCCGTCCCACAC 13088
Query 24224 GCCGAGGTAGGCCCGGGTCTCCGGATCGTAATTGCTCGGCACTTGGACCTTCCGCCCGCG 24283
|||| ||||| |||||| |||||||||| ||||| ||||| ||| ||||||| |
Sbjct 13087 GCCGCTGTAGGTCCGGGTGGCCGGATCGTAGTTGCTTGGCACGCGGATGATCCGCCCTTG 13028
Query 24284 GCAGTCGACTGTGACAGCCGGAATGTTGCTGAACTGCTCTGCGCTGAACTCGACGTACAG 24343
| |||| | | ||||| ||||||| || ||||| | | |
Sbjct 13027 CAATTCGAAGGAGCGGTTGGGAATCGACTGGAACTGCGAGGCATCGAACTGCAGGCCGAT 12968
Query 24344 CAGGGCCGTGTTCGGGTAGCGCAGCTTCGCGTCGATCACCTCGGTG-TAGCCGGCGATCA 24402
| |||| ||||||||||| ||| ||||||||||| |||||| | | | | |
Sbjct 12967 GATCGCCGAACCCGGGTAGCGCAACTTGGCGTCGATCACGTCGGTGATGGACTCCACGCT 12908
Query 24403 GCATGGTGTCGGCGATGCGGTTGTTGTTCTGGTTCGGCGTCAGGCGGCGGACGCGCACCT 24462
| |||| |||||||| | || | ||||| |||||| || || || |||||
Sbjct 12907 GG-TGGTATCGGCGATCGCCCCGCTGCTGGAGTTCGCCGTCAGCCGCCGCACCCGCACGG 12849
Query 24463 GCCAGCCATTGGTGGCCGCCGGCAGGTCGATCCGGCGGGAACGCTCGTAGCGGGTGGTGG 24522
|||||| ||||||| |||||||||| |||| |||| |||||||| | ||| |
Sbjct 12848 TCCAGCCGGCCTTGGCCGCTGGCAGGTCGACCCGGTGGGAGCGCTCGTACTTGCTGGAGC 12789
Query 24523 TCTTGCCATCGACGGCCTCGCGCAGCACCTCCTGATAGGCGCCGCCGTCGGTGGCCAGAT 24582
||||||| || |||| ||||||| || | || ||||||||||||| ||| |
Sbjct 12788 TCTTGCCGCTGAAGGCCGACTGCAGCACTTCGACGAACGCCCCGCCGTCGGTGGACAGCT 12729
Query 24583 CTACGGCATATTCGATCCG-GTACCCGCCGATGTTGCCGTTGGT-GTCCTGCTGCTGGAG 24640
| | ||| || || ||| ||| ||| | ||| ||||||| | || || | ||||
Sbjct 12728 CGATGGCGTA-ACGCACCGTGTAGCCGTTGGTGTCGCCGTTGCTGGTGTTGGT-CTGGGC 12671
Query 24641 CGCTGGCCAG---GCGAAGCGCAGGCGCACTGCGGAAAGCTGGGTATTGCTCAGCGAGCG 24697
| || || || | ||| | |||||| || || || || ||| | | | |||
Sbjct 12670 CAGGCGCGAGACCGCCAGGCGGATGCGCACCGCCGACAGTTGCAGGTTGGTGATGGCGCG 12611
Query 24698 CACCCAGGGCGTATCGCTGCGCAACTCGACGTTGACGCTGGTTTCGTTCTCAACGGCAGG 24757
|||||| |||||||||| || || || || |||||||| || || ||
Sbjct 12610 GGTCCAGGGTTGGTCGCTGCGCAGTTCCACCGCCACCTGGGACTCGTTCTCCACCGCCGG 12551
Query 24758 GATGCCCGGGATGTAGTCCTGGTCC 24782
| ||||||||||||| |||||||
Sbjct 12550 AAAGCCCGGGATGTAGGTCTGGTCC 12526
Score = 86.0 bits (94), Expect = 2e-12
Identities = 194/285 (68%), Gaps = 14/285 (5%)
Strand=Plus/Minus
Query 30530 AGTGTCATGGATGGAATGCCTGTTCAAAGGTCGCGGTCAGCCGGTAGA-CCCGGCCACCG 30588
|| ||||||||||||| |||||||| ||||| ||| | || ||| | ||| || ||
Sbjct 5241 AGGGTCATGGATGGAAGGCCTGTTCGAAGGTGGCGCTGAGGGTGTACATCCCTGCGCCCA 5182
Query 30589 AGGTTGACGGGCCGGTAGCCCGCACAGGTGTAGAAGCCCAAGTCGCCCAGGGGCGGCGTC 30648
| | || |||| ||||| | ||| ||| | ||| || |||||||| || |||
Sbjct 5181 ACGGCGA-GGGCTGGTAGGTCTTGCAGCGGTACAGCCCCTGTTCTCCCAGGGGTGGGGTC 5123
Query 30649 CAG-AGAAATGCACGCGCTCCGGTGTGGCGGTCCAGGAAGTCCATCACGGCCTTGAT--G 30705
||| |||| || | || ||| ||| ||| | |||| | || | | |||||| |
Sbjct 5122 CAGTAGAACGGCGTG-GCGCCGCGATGGGCGTCGATGAAGGCGATGATCGGCTTGATCCG 5064
Query 30706 G---TCGCCGCCGGCCCGGTGATGGACACCGGCCAGCTCTGGGACTTGCTGTTCAGACCT 30762
| ||| ||||| | || || || ||||||| ||||| |||| |||| | ||
Sbjct 5063 GCTTTCGTCGCCGAC-----GAAGGTCAGCGGCCAGGACTGGGTCTTGTTGTTGATGCCG 5009
Query 30763 TCGCTCACCAACTGCTTGTAGCCGTCACCGAATTGCGCGGACCTG 30807
|| |||| ||||| ||||||||| ||||| | || ||| ||
Sbjct 5008 TCCTGGACCACCTGCTGGTAGCCGTCGCCGAAGCGGGCCGACTTG 4964
>seq813
Length=55966
Score = 111 bits (122), Expect = 6e-20
Identities = 225/334 (67%), Gaps = 0/334 (0%)
Strand=Plus/Minus
Query 7276 AGAGGTGTTAACAAAGTCATTCTGGTTGGTAACGTCGGTGGTGACCCGGAAACCCGCTAC 7335
||||| || ||||| || ||||| || ||||| | || ||||||||| ||||||
Sbjct 13774 AGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTAC 13715
Query 7336 ATGCCCAACGGCAATGCGGTGACCAACATCACCCTCGCCACCAGCGAGAGCTGGAAGGAC 7395
||||| | || || || ||||||| || || || || ||| |||| ||
Sbjct 13714 ATGCCGAGTGGTGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGAT 13655
Query 7396 AAGCAGACCGGCCAGCAACAGGAACGCGCCGAGTTCCACCGCGTGGTGTTCTTCGGTCGC 7455
|| |||||| || | || | | || | |||||||||||| | || ||
Sbjct 13654 AAAGCGACCGGTGAGATGAAAGAGCAGACTGAATGGCACCGCGTGGTGCTGTTTGGCAAA 13595
Query 7456 CTGGCGGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCCCAGGTCTACGTCGAAGGCAGC 7515
||||| || | ||||| ||||| ||||| || ||||| |||||||| ||||||||
Sbjct 13594 CTGGCAGAAGTTGCCGGTGAGTATCTGCGTAAAGGTTCTCAGGTCTATATCGAAGGCCAA 13535
Query 7516 CTGCGCACCCGCAAGTGGCAGGCTCAGGACGGCCAGGACCGATACACCACCGAGGTAATC 7575
||||||||||| || ||| | |||| |||| || ||||||||||| || |
Sbjct 13534 CTGCGCACCCGTAAATGGACCGATCAGTCCGGCGCTGAGAAGTACACCACCGAAGTTGTG 13475
Query 7576 GTCGACATGCACGGACAGATGCAGATGCTTGGCG 7609
|| || | ||| ||||||||||| ||||
Sbjct 13474 GTAAACGTTGGCGGTACCATGCAGATGCTGGGCG 13441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 194815049620468
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |