Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_028672.1
Length=149732
Score E
Sequences producing significant alignments: (Bits) Value
seq974 87.8 2e-12
>seq974
Length=31311
Score = 87.8 bits (96), Expect = 2e-12
Identities = 171/248 (69%), Gaps = 10/248 (4%)
Strand=Plus/Plus
Query 26551 TCACCAGACTCAATCAGTACGCAAGAACTAAACTGACGGGTCGGGGTACGAACACCCGCC 26610
|||||| |||| ||||||||||| || || ||||||||||| ||||| || || || | |
Sbjct 283 TCACCACACTCGATCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTGCGCACGCCAGAC 342
Query 26611 ATGATCGGGGTCGGCAAAGACACCTTCATCAGCGATACGTTCTCGTACAGGTCAACAAT- 26669
||||| || || |||| ||| | ||| | | |||||| ||||| | ||| |
Sbjct 343 ATGATTGGCGTAGGCAGAGAAATCTTGAACGTCGATACCGCATCGTAGA----AACGCTT 398
Query 26670 -ACGT--TCCAGACGGGTCTTTTTGTCTTCCTGTGACAAAAGGCCCATTGCAATCAGCAT 26726
|||| ||||||||||| | | | || || |||| || | ||| ||
Sbjct 399 CACGTAATCCAGACGGGTGTCACGCGGATAGTTAGAGAACAGGCAGGCGGCCACCAGAAT 458
Query 26727 -CAGCGCCATCTGAGGGGATTCGTAAATCTCCCCGGTGACACGGTTTTTGACCAGGTACT 26785
|| | | ||| | | |||||| ||||| ||||| |||||||| | |||||||| |
Sbjct 459 ATAGAG-GAACTGGGCGCTTTCGTAGATCTCACCGGTTACACGGTTCTGAACCAGGTATT 517
Query 26786 TGTCTTCG 26793
|| |||||
Sbjct 518 TGCCTTCG 525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479003658102080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |