Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_028672.1 Length=149732 Score E Sequences producing significant alignments: (Bits) Value seq974 87.8 2e-12 >seq974 Length=31311 Score = 87.8 bits (96), Expect = 2e-12 Identities = 171/248 (69%), Gaps = 10/248 (4%) Strand=Plus/Plus Query 26551 TCACCAGACTCAATCAGTACGCAAGAACTAAACTGACGGGTCGGGGTACGAACACCCGCC 26610 |||||| |||| ||||||||||| || || ||||||||||| ||||| || || || | | Sbjct 283 TCACCACACTCGATCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTGCGCACGCCAGAC 342 Query 26611 ATGATCGGGGTCGGCAAAGACACCTTCATCAGCGATACGTTCTCGTACAGGTCAACAAT- 26669 ||||| || || |||| ||| | ||| | | |||||| ||||| | ||| | Sbjct 343 ATGATTGGCGTAGGCAGAGAAATCTTGAACGTCGATACCGCATCGTAGA----AACGCTT 398 Query 26670 -ACGT--TCCAGACGGGTCTTTTTGTCTTCCTGTGACAAAAGGCCCATTGCAATCAGCAT 26726 |||| ||||||||||| | | | || || |||| || | ||| || Sbjct 399 CACGTAATCCAGACGGGTGTCACGCGGATAGTTAGAGAACAGGCAGGCGGCCACCAGAAT 458 Query 26727 -CAGCGCCATCTGAGGGGATTCGTAAATCTCCCCGGTGACACGGTTTTTGACCAGGTACT 26785 || | | ||| | | |||||| ||||| ||||| |||||||| | |||||||| | Sbjct 459 ATAGAG-GAACTGGGCGCTTTCGTAGATCTCACCGGTTACACGGTTCTGAACCAGGTATT 517 Query 26786 TGTCTTCG 26793 || ||||| Sbjct 518 TGCCTTCG 525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479003658102080