Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_028696.2
Length=41338
Score E
Sequences producing significant alignments: (Bits) Value
seq997 188 2e-43
>seq997
Length=29618
Score = 188 bits (208), Expect = 2e-43
Identities = 291/408 (71%), Gaps = 8/408 (2%)
Strand=Plus/Minus
Query 36807 GCATGAATTTGGAAAATGTAGTGAAGTTTCACTTCGCAAAATCTACTCAGATAAACGA-T 36865
|||||||| | |||||| | || | ||||||||| ||||| || ||| | ||| |
Sbjct 23438 GCATGAATCTTGAAAATACTCTCAAATATCACTTCGCCAAATCGACAATGATTAGCGACT 23379
Query 36866 ATCCCTCGCGCAACAGCTTCAGAAGCGTTAACTGGCACTGATGTTATGGCAGCTATGGGT 36925
|||| || |||| || ||||| || ||||| || || ||| | ||||| ||||||||
Sbjct 23378 CTCCC-CGGACAACGGCATCAGATGCATTAACCGGAACGGATATCATGGCTGCTATGGGC 23320
Query 36926 ATGACTCAAAGTCGCGCATCGTTAGGTTACAGCGCGTTTCTTGGGAAGATGGAAATCAGC 36985
||||| || || || | | ||||||||||| ||||| |||||||||| ||||||
Sbjct 23319 ATGACGCAGGAACGGGCCGCCATGGGTTACAGCGCTTTTCTCGGGAAGATGGGGATCAGC 23260
Query 36986 AGCAATGACCGTGAGAAAGCTATTGAACTGCTGACCCAATATGCACTTGAGCACTGCGAT 37045
| ||||||||| |||| || ||||| ||| | | || ||||| || | ||||||
Sbjct 23259 AACAATGACCGGGAGAGGGCGATTGAGTTGCAGGCTCAGTATGCGCTGACTAAGTGCGAT 23200
Query 37046 AAGGTTTCCGCCTTACGTAAGCTCGAAAACGATATTAAACCAAAGGTAATGCAAGTGCTC 37105
|||| | || ||||| ||||| | || ||||||||| ||||||||| | |
Sbjct 23199 CGGGTTGCGGCATTACGGAAGCTTAATGCAGAGATTAAACCACTGGTAATGCATCAGTTG 23140
Query 37106 GCAACATTCGCATTTGCTGATTACTCACGTAGCGCTGCCAGTACGCGAACC--TGTGACT 37163
|| | ||||| || | || || || || ||||| ||||| || ||| | ||||| |
Sbjct 23139 GCCAGCTTCGCTTTCGAAGACTATTCCCGCAGCGCCGCCAG--CGTGAAACAGTGTGATT 23082
Query 37164 GCTG-TGGTGGCAAGAAGTTTATCGATGCTGAAGTCATGACGATGAAA 37210
|||| | | | |||| | || || || ||||| || | |||||||||
Sbjct 23081 GCTGCTCGGGTCAAGGA-TTCATTGAGGCTGATGTTTTCACGATGAAA 23035
Score = 167 bits (184), Expect = 6e-37
Identities = 177/232 (76%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 38893 ATGAGTCGGTTAACCGCGATTATCTCCGCTCTGGTTATCTGCATCATCGTCTGTCTGTCA 38952
||||| | ||||||||||| |||| |||| | ||||||||| | | |||| | || |
Sbjct 18254 ATGAGCTGATTAACCGCGATCATCTGCGCTGTCGTTATCTGCCTGCTGGTCTTTATGGCT 18195
Query 38953 TGGGCTGTTAATCATTACCGTGATAACGCCATTACCTACAAAGAGCAGCGCGATAAAAAA 39012
||||| |||| || || || || |||||||| ||||||||||||||||||||| |||
Sbjct 18194 TGGGCGATTAACCACTATCGCGACAACGCCATCACCTACAAAGAGCAGCGCGAT---AAA 18138
Query 39013 GTCAGTG---AACTGAAGCAGGCGACCGCCACCATTACTGACATGCAGCAGCGCCAGCGT 39069
| || || |||| | ||||| | ||||||||| | ||||||||| |||||||||
Sbjct 18137 GCCACTGAGAAACTCAGCCAGGCCAACGCCACCATCAAAGACATGCAGACCCGCCAGCGT 18078
Query 39070 GATGCTGATGCACTTGATGCTAAATACACGAAGGAGTTAGCTGATGCGAAAG 39121
||||| | ||| || ||||| |||||||| || |||||||||||||
Sbjct 18077 GATGCCGCTGCGCTGGATGCCAAATACACTGGAGAACCGGCTGATGCGAAAG 18026
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 132157184496400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |