Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_028699.1
Length=40740
Score E
Sequences producing significant alignments: (Bits) Value
seq997 663 0.0
>seq997
Length=29618
Score = 663 bits (734), Expect = 0.0
Identities = 1012/1427 (71%), Gaps = 41/1427 (3%)
Strand=Plus/Minus
Query 35572 GTATACTGTATAAAAATACAGTG-TATGCAATGGGGGCTACTA-TGAAAATTGAATTAAC 35629
|||||||||||| |||||||| | || | || || | || ||||||| || |||||
Sbjct 25261 GTATACTGTATATGCATACAGTGGTTTGTCACGGAGGGAAATAATGAAAATCGAGTTAAC 25202
Query 35630 CATTGATCGCACAAAGAAACTTCCCGAAGGCGCGGAAGCGGCACTTGAGAAAGAACTGCT 35689
||||||||||| ||||||||||| || || || | | || || ||| |||||||||
Sbjct 25201 CATTGATCGCATGAAGAAACTTCCTGATGGAGCTATACCTGCGCTCGAGTCAGAACTGCT 25142
Query 35690 TAAGAGGCTCAATGATCAGTATGAAGGTTGC-AGCTTGGTTATTCGTCGCGCCGGGTCTG 35748
|| ||||||| |||| || |||| ||||| ||| || ||| | ||
Sbjct 25141 CAAAAGGCTCAGCACACAGTTCGACAATTGCCAGCTTACA-ATTAAGCGTGCCAGTAATG 25083
Query 35749 ACGGCCTAAGCGTTTATGGCGCTGAAAAGGACGACAAAAAGAAAGTTGAAAAAATCCTCC 35808
|||| | | |||| || | || ||| ||||| || ||| | ||| | |
Sbjct 25082 ACGGTTTGACTGTTTTCGGTGGCGACAAG--------AAAGAG-GTCGAACATATCGTGC 25032
Query 35809 AGGAGACCAGGGAGAGCGCTGACGACTGGTTTTATTAACATTGCGCTTAATG---CTGGC 35865
||||||| |||| ||||| ||||| |||||||||||| | ||| | ||| ||||
Sbjct 25031 AGGAGACTTGGGAAAGCGCGGACGAGTGGTTTTATTAA--TCGCG-TGAATTTCACTGGA 24975
Query 35866 GCGCATTTTTCAGAATACCGCAATTTGCGTATCCCTTTGATGCTGCTGCCGACAATTTTT 35925
|| ||| ||| || ||| ||||||| |||| |||| | |||| | | ||
Sbjct 24974 GCAG-TTTCAAAGAGTATCGCTGTTTGCGTTCCCCTG----GCTGTTCCCGATTACTGTT 24920
Query 35926 AACCGCGTCTGTACATCGC-CTGAAGGGAGAACAAAAATTGAGTAATTCAG----CTTTG 35980
|||||||| || |||| ||| || ||| | || ||| | ||| ||||
Sbjct 24919 TACCGCGTCAATAAGTCGCTCTGGGGG------AAATAGTGTGTAGTGCAGATGCCTTT- 24867
Query 35981 CAAAAGTCAGAAGATAGCTGGTATGACATTGTAAGAAGATCTGATGGCTGCGTGGTGTTT 36040
|| |||| ||| ||||| ||| | || ||||| | ||| || | | |
Sbjct 24866 ---AATGCAGATGATCAATGGTACGACGTGGTCAGAAGGGCCGATAAAGCAGTTATCTAT 24810
Query 36041 AGCTTTCCATCATCAGGCAGGCATCTTATCTATCGTGTAAATGGCATGGTATCTATGCGT 36100
||||| || | ||| || |||| | ||||| |||||||| || || || | ||
Sbjct 24809 AGCTTCCCGGCGGAAGGGAGATATCTGGTTTATCGAGTAAATGGAATAGTTTCATTACGA 24750
Query 36101 CCTTTGCTGGATGATGAAGAAGTTTTTACTCCCAACGGTTTTATGCATTTTATTCGCCGT 36160
|| || || || || |||||| | || ||| ||| || |||||||| ||| ||
Sbjct 24749 CCGTTACTCGAAGAGGAAGAAATCTTCACTTTCAATGGGTTTATGCAATTTGCAAAACGA 24690
Query 36161 CTCGGCTACCGGGTAACACCACCTTCTGATAATATGAAATCAACGGCCTGAACAACCGTT 36220
|| || ||||| || |||||||| ||||||| ||| ||| ||||||||||||| |
Sbjct 24689 CTGGGGTACCGAGTTACACCACCGTCTGATATTATTCTTTCATAGGCCTGAACAACCTAT 24630
Query 36221 AACCTTCTGCGCCACGGAGAATACCATGGCGCACGAATTACAACTCATCAAGCAGTCATC 36280
| ||| ||||||||||||| |||||||||| ||||||||||| || || || ||
Sbjct 24629 A-CCTGATGCGCCACGGAGATAACCATGGCGCTAGAATTACAACTTATAAAACACCACTC 24571
Query 36281 TGGAATTCTGATCCCCGCTACGCCGGAGACCAGCGAAATTCTGCAATCAAAAATTAAACT 36340
||||| |||||||| |||||||| ||||||||||| || |||||||| |||| ||
Sbjct 24570 AGGAATACTGATCCCGGCTACGCCCGAGACCAGCGATATCCTGCAATCTAAAACCCGGCT 24511
Query 36341 CGGTGCCGTGCTGGTGGCTGAGTTCCGTCAGGTTAGGAATCCTGCATTCCATCGCCGCTT 36400
||| | || || || || |||||| | | ||| | || || |||||||| || |||||
Sbjct 24510 CGGCGATGTTCTTGTTGCCGAGTTCAGGCGGGTACGAAACCCGGCATTCCACCGGCGCTT 24451
Query 36401 TTTCGCGTTGCTTAATCTTGGGTTTGAATACTGGGAACCCACCGGCGGCGCCATTTCTGC 36460
||| ||| | || ||||| || ||||||||||||||||| |||||||| || ||||||
Sbjct 24450 TTTTGCGCTTCTCAATCTCGGTTTTGAATACTGGGAACCAACCGGCGGGGCTATTTCTAG 24391
Query 36461 CAATGAGCGCAAACTGGTAAACGGTTATGCAAAGTTTCTCGCTGCATATGGCGGGAATGA 36520
||| ||||| || ||| | | ||| || || ||||| || ||| ||||||||||||| ||
Sbjct 24390 CAACGAGCGGAAGCTGATTACCGGCTACGCCAAGTTCCTGGCTTCATATGGCGGGAACGA 24331
Query 36521 GGGCGCATTACTGGATGCGGCTGAACAGTATCTGGAACAGATTGCAAACCGCCGGCTAAC 36580
||| || | | ||||| || |||||||| ||||||||| |||| | || || | ||
Sbjct 24330 GGGGGCTCTGATCGATGCTGCCGAACAGTACCTGGAACAGGTTGCTTATCGGCGTGTCAC 24271
Query 36581 AAACGGGATTAGCCTGTGTAAATCATTCGATGCCTACCGCGCATGGGTGACGGTTGAGGC 36640
|| || ||||||||||| ||||| |||||||| |||||| ||||||||| ||||||||
Sbjct 24270 GAATGGCATTAGCCTGTGCAAATCCTTCGATGCTTACCGCTCATGGGTGATCGTTGAGGC 24211
Query 36641 TGGTCACTATGACGCCATCCAGTTACCGGACGGCACCCTTCGCAAACATCCCCGCAGCAT 36700
|| |||| ||| ||||| ||| |||| ||||| || || || ||||| || |||||
Sbjct 24210 AGGGCACTTTGATGCCATTCAGCTACCTGACGGAACACTCAAAAAGCATCCACGTAGCAT 24151
Query 36701 CGCTTTTTCCAGCATGGATGAGGTCGAATTTCAGCAGTTGTATAAATCCGCGCTTGATGT 36760
| | || ||| |||||| ||| |||| || |||||| | |||||| | ||||| |||||
Sbjct 24150 CTCATTCGCCAACATGGACGAGCTCGAGTTCCAGCAGCTCTATAAAGCTGCGCTCGATGT 24091
Query 36761 GCTCTGGCGGTGGATTTTATCACGTACATTTCGTACTCAGCGCGAGGCGGAGAACGCCGC 36820
||||| || ||| | | || ||| |||| |||| || ||||| || || | |||
Sbjct 24090 TCTCTGACGCTGGGTCCTGTCGCGTTCATTCCGTAGTCGTGATGAGGCAGAAAATGTCGC 24031
Query 36821 CGCCCAGCTAATGAGCTTTGCGGGGTGATGGCGATGAAATACTCCTGGTTCCATCATCAC 36880
||| |||||| | |||||||||||||||| ||||| | |||||||||| || |
Sbjct 24030 CGCGCAGCTACTTGACTTTGCGGGGTGATGG-AATGAAGAAGACCTGGTTCCACCACACC 23972
Query 36881 GACTGCACAACCGAGCAGGCCGACACGCTGATATCGGATTATCAGAAGCGGGGCGTAAGG 36940
|| |||| ||||| ||||||||| ||| | | ||| | ||| ||||| ||
Sbjct 23971 GATTGCAGCACCGAACAGGCCGACGAACTGGTTAAGCGTTACAAAGCGCGCGGCGTTCGG 23912
Query 36941 ACAGAAAAGAGCCTGAACCCTGACTTCATTACCTGGACTGTCAGCGC 36987
|| ||||| ||||| || | | | |||||||||||||| ||
Sbjct 23911 GTTGAGCGCAGCCTTAACCCGGATTACGTGACCTGGACTGTCAGTGC 23865
Score = 82.4 bits (90), Expect = 2e-11
Identities = 111/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 39837 AATCACTACCGCAATAACGCTATCACTTACAAGGACCAGCGCGACACCGCTACCCACAAG 39896
|| ||||| ||| | ||||| ||||| ||||| || |||||||| | || || | ||
Sbjct 18185 AACCACTATCGCGACAACGCCATCACCTACAAAGAGCAGCGCGATAAAGCCACTGAGAAA 18126
Query 39897 CTGACACTGGCGAACGCGACAATTACCGACATGACGAAGCGCCAGCGTGACATTGCCGCC 39956
|| | | ||| ||||| || || | |||||| || ||||||||||| || ||
Sbjct 18125 CTCAGCCAGGCCAACGCCACCATCAAAGACATGCAGACCCGCCAGCGTGATGCCGCTGCG 18066
Query 39957 CTCGATGCAAAATACACGAAGGAACTAGCTGATGC 39991
|| ||||| |||||||| |||| ||||||||
Sbjct 18065 CTGGATGCCAAATACACTGGAGAACCGGCTGATGC 18031
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 130243625263256
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