Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_028760.1
Length=49037
Score E
Sequences producing significant alignments: (Bits) Value
seq960 86.0 2e-12
seq997 82.4 2e-11
>seq960
Length=33163
Score = 86.0 bits (94), Expect = 2e-12
Identities = 100/135 (74%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 25887 GATTATCCAGGTTCCGAGCAACTACGACCCTGTTAACAGGACATATGCCGGAACGTGGGA 25946
||| |||| || || ||||||||||| || | | | |||| || ||| ||||||
Sbjct 13036 GATCATCCGCGTGCCAAGCAACTACGATCCGGCCACCCGGACCTACAGCGGCGTGTGGGA 13095
Query 25947 CGGAACTTTCAAATGGGCGTGGAGCAACAACCCGGCCTGGGTTCTTTACGACCTGATCAT 26006
||| || ||||| | ||| |||| | |||||||||||||| | ||||||||| | |
Sbjct 13096 CGGCACCTTCAAGTCGGCCTGGACCGACAACCCGGCCTGGATCTACTACGACCTGCTGCT 13155
Query 26007 GAATCAGCGTTATGG 26021
| | |||||||||||
Sbjct 13156 GCACCAGCGTTATGG 13170
>seq997
Length=29618
Score = 82.4 bits (90), Expect = 2e-11
Identities = 75/93 (81%), Gaps = 4/93 (4%)
Strand=Plus/Minus
Query 21466 TGCAGCAGCACAAAGGGCTTGACGACAAAATCAGCCAGCAGCGCAAAGACTACTTT--AC 21523
|||| ||||| |||||||| |||||| |||||||| |||||||||||| |||| ||
Sbjct 3383 TGCAACAGCATAAAGGGCTGAACGACACTATCAGCCAACAGCGCAAAGAC--CTTTGGAC 3326
Query 21524 CACCGTCGCAAAATTCCAGGTGCTGGAAGAAGC 21556
|| | || ||||| |||||||||||||| ||
Sbjct 3325 TACGGAAGCGAAATTTCAGGTGCTGGAAGAGGC 3293
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 156793459640172
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |