Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_028827.1 Length=50165 Score E Sequences producing significant alignments: (Bits) Value seq718 105 2e-18 >seq718 Length=85064 Score = 105 bits (116), Expect = 2e-18 Identities = 128/172 (74%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 40174 GAAGTCGATGTCAACGTCGGGCATGGACACGCGCTCGGGGTTCAGGAACCGCTCGAAGAT 40233 |||||||| ||| | |||||||||||| || || || ||||| ||||| || ||||| | Sbjct 5216 GAAGTCGACGTCGAAGTCGGGCATGGAAACACGTTCCGGGTTGAGGAAACGTTCGAACAG 5275 Query 40234 GAGCCCGTGCTCCAGTGGATCGAGGTCGGTGA-TCCCGAGGCAGTAGGCGACCAGCGAAC 40292 || || ||||| |||||||||||||| | | | ||| || || |||||||| | Sbjct 5276 CAGGTCGAATTCCAGCGGATCGAGGTCGGTAATTTTTAATGCA-TACGCCACCAGCGAGC 5334 Query 40293 CGGCTGCCGAGCCTCGCCCAGGACCGACCCACACGCCGTTCTCCTTGGCCCA 40344 | || | ||||| || || ||||| ||| |||||||| ||||| | ||| Sbjct 5335 CCGCACCGGAGCCACGGCCCGGACCTACCGGTACGCCGTTATCCTTCGACCA 5386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160402982742156