Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_028829.1 Length=248088 Score E Sequences producing significant alignments: (Bits) Value seq974 125 1e-23 >seq974 Length=31311 Score = 125 bits (138), Expect = 1e-23 Identities = 270/397 (68%), Gaps = 10/397 (3%) Strand=Plus/Plus Query 236293 TCAACACCTTTGTTGTTCTTCAGAACTAACAGTTTTTCAACTTCTAAGTGCCAAATCGGG 236352 |||||||| |||||| ||||| || | ||| |||| ||||| | |||||| || ||| Sbjct 1 TCAACACCACGGTTGTTTTTCAGGACCAGCAGGCTTTCCACTTCCAGGTGCCACATAGGG 60 Query 236353 TAAGTTAGAGTCGCAGCACCACCACGTACACCACCTTGAGAACACGATTTAACCGCAGTT 236412 || || ||||||||||| || || || || || ||||| || ||||| ||||| || Sbjct 61 TAGAACAGGGTCGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTTACCGCCGTC 120 Query 236413 TGAAAGTGTTTCCAGAATGGAATTACA-CCAGTGTGACGAAT--CTCACCTGAACGAA-- 236467 || ||||| || |||| || | |||| || ||||| |||| ||||| |||| Sbjct 121 TGGAAGTGCTTATAGAACGGGA-TACAGCCGGTGTG--GAATGCTTCACCGCCGCGAATC 177 Query 236468 CGACTGCCCCTTCAGCACGAATCGCACCGCCATTCACACCGATACCTGCACGCTTACTAA 236527 | |||||| ||||| || |||| | || | |||||||| ||||||| || Sbjct 178 GGGCTGCCC--AGCGCACGGATGCGACCGGCGTTGATGCCGATACCGGCACGCTGGGAAA 235 Query 236528 TGTAACTTACAATTGATTTAGCCACTTCATTGATTGAATGCAAAGAGTCGCCTGATTCAA 236587 ||| | || || | | | | | ||||| |||| || ||| || | || | Sbjct 236 CGTATTTCACGATGGCGCTGGACGTGGCGTTGATGGAATCCAGGCTGTCACCACACTCGA 295 Query 236588 TCTTAACACACGAACTAAACTGGCGTGTCGGGGTACGAACGCCTGCCATAATCGGTGTCG 236647 || || || || || ||||| || || ||||| || ||||| | ||| || || || | Sbjct 296 TCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTGCGCACGCCAGACATGATTGGCGTAG 355 Query 236648 GTAATGAAAGTTTGTGAGTCGAAACTGCATTGTAGAA 236684 | | |||| ||| ||||| || |||| |||||| Sbjct 356 GCAGAGAAATCTTGAACGTCGATACCGCATCGTAGAA 392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 793735800075520