Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_028829.1
Length=248088
Score E
Sequences producing significant alignments: (Bits) Value
seq974 125 1e-23
>seq974
Length=31311
Score = 125 bits (138), Expect = 1e-23
Identities = 270/397 (68%), Gaps = 10/397 (3%)
Strand=Plus/Plus
Query 236293 TCAACACCTTTGTTGTTCTTCAGAACTAACAGTTTTTCAACTTCTAAGTGCCAAATCGGG 236352
|||||||| |||||| ||||| || | ||| |||| ||||| | |||||| || |||
Sbjct 1 TCAACACCACGGTTGTTTTTCAGGACCAGCAGGCTTTCCACTTCCAGGTGCCACATAGGG 60
Query 236353 TAAGTTAGAGTCGCAGCACCACCACGTACACCACCTTGAGAACACGATTTAACCGCAGTT 236412
|| || ||||||||||| || || || || || ||||| || ||||| ||||| ||
Sbjct 61 TAGAACAGGGTCGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTTACCGCCGTC 120
Query 236413 TGAAAGTGTTTCCAGAATGGAATTACA-CCAGTGTGACGAAT--CTCACCTGAACGAA-- 236467
|| ||||| || |||| || | |||| || ||||| |||| ||||| ||||
Sbjct 121 TGGAAGTGCTTATAGAACGGGA-TACAGCCGGTGTG--GAATGCTTCACCGCCGCGAATC 177
Query 236468 CGACTGCCCCTTCAGCACGAATCGCACCGCCATTCACACCGATACCTGCACGCTTACTAA 236527
| |||||| ||||| || |||| | || | |||||||| ||||||| ||
Sbjct 178 GGGCTGCCC--AGCGCACGGATGCGACCGGCGTTGATGCCGATACCGGCACGCTGGGAAA 235
Query 236528 TGTAACTTACAATTGATTTAGCCACTTCATTGATTGAATGCAAAGAGTCGCCTGATTCAA 236587
||| | || || | | | | | ||||| |||| || ||| || | || |
Sbjct 236 CGTATTTCACGATGGCGCTGGACGTGGCGTTGATGGAATCCAGGCTGTCACCACACTCGA 295
Query 236588 TCTTAACACACGAACTAAACTGGCGTGTCGGGGTACGAACGCCTGCCATAATCGGTGTCG 236647
|| || || || || ||||| || || ||||| || ||||| | ||| || || || |
Sbjct 296 TCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTGCGCACGCCAGACATGATTGGCGTAG 355
Query 236648 GTAATGAAAGTTTGTGAGTCGAAACTGCATTGTAGAA 236684
| | |||| ||| ||||| || |||| ||||||
Sbjct 356 GCAGAGAAATCTTGAACGTCGATACCGCATCGTAGAA 392
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 793735800075520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |