Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_028876.1
Length=109800
Score E
Sequences producing significant alignments: (Bits) Value
seq637 96.9 2e-15
>seq637
Length=122170
Score = 96.9 bits (106), Expect = 2e-15
Identities = 139/196 (71%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 96965 TCGGTGACCACCGGCTGCAAAAGGTGGGGGATACCGTTGTACGGGGTGAGTTCCACCATC 97024
||||||||||| | || || || |||||||| | ||| || ||||| | |||
Sbjct 95520 TCGGTGACCACTTCCGTCAGCAGATGCGGGATACCTTCGTAGACGGACAGTTCGAGCATT 95461
Query 97025 TTCGGGTCGATCATGATGAGTTTGACCCGATCAGGATTGGCTCGGTAGAGCATGGAAACC 97084
||||||||||||||||||| || || || | ||| |||||||||| |
Sbjct 95460 TTCGGGTCGATCATGATGAAACGCACATCTTCCGGCTGCGCTTTGTAGAGCATGCTGAGG 95401
Query 97085 AGCATCGAGTTGATGAAGCTGGACTTACCTGATCCGGTGGCGCCAGCCACCAGCAGGTGC 97144
| ||| | ||| | | | ||||||||| || ||||| | || ||||||||||||||
Sbjct 95400 ATCATGGCGTTCACGCCGACGGACTTACCGGAACCGGTCGTACCGGCCACCAGCAGGTGA 95341
Query 97145 GGCATTTTGGCCAGGT 97160
|||||||| || ||||
Sbjct 95340 GGCATTTTCGCGAGGT 95325
Score = 95.1 bits (104), Expect = 8e-15
Identities = 199/295 (67%), Gaps = 5/295 (2%)
Strand=Plus/Minus
Query 96570 CGGGCAGGAATAACCC--GTCACCCATTCCCATGAGCTGCTCGGCTCCGCCCTCGTCCAG 96627
||||| ||||||| | ||||||||| |||| ||| ||| || ||||||| ||| ||
Sbjct 96013 CGGGCCGGAATAAAGCATGTCACCCATACCCAGCAGCGACTCTGCGCCGCCCTGGTCAAG 95954
Query 96628 GATCACCCGGCTATCGGTGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCACGTTGGA 96687
|| ||| ||| | || | || || | || | | ||| | ||| |
Sbjct 95953 AATGGTACGGGAGTCGATTTTACTTGATACGGTAAAGGCGATACGCGTCGGAATGTTCGC 95894
Query 96688 TTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAAT 96747
||||||||| || || | || ||||| || || ||||| || ||||| ||||| |||||
Sbjct 95893 TTTGATAAGACCCGTAATAACGTCCACCGAAGGACGCTGGGTGGCCAGCACGAGGTGAAT 95834
Query 96748 ACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTTGTA 96807
|||||| || ||||| ||||| || | || ||| | ||| || | |||||
Sbjct 95833 ACCGGCCGCACGCGCTTTCTGCGCCAGACGAGCAA---TCAACTCTTCTACCTTCTTACC 95777
Query 96808 GCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGATGTAGGGGAGT 96862
| || |||||| ||||| || | || || |||| || ||||| || || |||
Sbjct 95776 GACGGTCATCATCAGGTCAGCAAACTCATCCACCAGCACGACGATATAAGGCAGT 95722
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 351227520461874
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |