Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_028890.1 Length=162486 Score E Sequences producing significant alignments: (Bits) Value seq995 89.7 5e-13 >seq995 Length=29666 Score = 89.7 bits (98), Expect = 5e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 27047 GGGGAGGTCGGTTCGATTCCGACATGTCCCTCCAATACGCCTTCTTAGCTCAGTTGGTAG 27106 |||| | |||||||| ||| ||| ||| ||| | || | |||||||||||||||| Sbjct 22207 GGGGTCGGCGGTTCGAGCCCGTCATCGCCCACCATTTCGGGTCGTTAGCTCAGTTGGTAG 22148 Query 27107 AGCGATTGACTTGTAATCAATAGGTCGTGGGTTCGAATCCTACA 27150 ||| ||||||| |||||||| ||||| |||||||||||| || Sbjct 22147 AGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCA 22104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519815542875040