Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_028892.1 Length=49949 Score E Sequences producing significant alignments: (Bits) Value seq718 93.3 1e-14 >seq718 Length=85064 Score = 93.3 bits (102), Expect = 1e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 39081 GAAGTCGATGTCCACGTCGGGCATGGAGACACGCTCAGGGTTCAGGAACCGCTCGAAGAT 39140 |||||||| ||| | |||||||||||| ||||| || ||||| ||||| || ||||| | Sbjct 5216 GAAGTCGACGTCGAAGTCGGGCATGGAAACACGTTCCGGGTTGAGGAAACGTTCGAACAG 5275 Query 39141 GAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCC 39200 || || | || || |||||||| || | || ||||| |||||||||| Sbjct 5276 CAGGTCGAATTCCAGCGGATCGAGGTCGGTAATTTTTAATGCATACGCCACCAGCGAGCC 5335 Query 39201 AGCCGCAGAGCCGCGCCCAGGGCCGACCCACACGCCGTTCTCCTTCGCCCA 39251 || | ||||| || || || || ||| |||||||| ||||||| ||| Sbjct 5336 CGCACCGGAGCCACGGCCCGGACCTACCGGTACGCCGTTATCCTTCGACCA 5386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159711797467308