Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_028925.1
Length=170822
Score E
Sequences producing significant alignments: (Bits) Value
seq974 122 1e-22
>seq974
Length=31311
Score = 122 bits (134), Expect = 1e-22
Identities = 278/417 (67%), Gaps = 6/417 (1%)
Strand=Plus/Plus
Query 143139 TCAACGCCCTTGTTGTTCTTCAGAACGAGTAAATTTTCAACTTCCAAATGCCATAAAGGA 143198
||||| || |||||| ||||| || || | |||| ||||||| ||||| | |||
Sbjct 1 TCAACACCACGGTTGTTTTTCAGGACCAGCAGGCTTTCCACTTCCAGGTGCCACATAGGG 60
Query 143199 TAATAAGCAGTAGCAGCGCCGCCACGGATTCCACCTTGTGAACAGGATTTAACAGCCGTT 143258
|| | || ||||| ||||| || | || || || || |||||||| || |||||
Sbjct 61 TAGAACAGGGTCGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTTACCGCCGTC 120
Query 143259 TGGAAATGTTTCCAGAACGGAATAACACCAGTATGGCGAACTTCACCCATACCGATTTTC 143318
||||| || || ||||||| ||| || || ||| ||||||| ||| ||
Sbjct 121 TGGAAGTGCTTATAGAACGGGATACAGCCGGTGTGGAATGCTTCACCG---CCGCGAATC 177
Query 143319 GAACCTTCA---GCACGAATCATACCAACGTTGATGCCGATACCCGCACGCTTACTGATA 143375
| | | ||||| || ||| |||||||||||||||| ||||||| |
Sbjct 178 GGGCTGCCCAGCGCACGGATGCGACCGGCGTTGATGCCGATACCGGCACGCTGGGAAACG 237
Query 143376 TATTCGATGATTGAATTGGCCGTCTTATTAATTGACTTCAGGGAGTCAGCAGCTTCGATA 143435
|||| | ||| | ||| ||| || || || | |||| |||| || |||||
Sbjct 238 TATTTCACGATGGCGCTGGACGTGGCGTTGATGGAATCCAGGCTGTCACCACACTCGATC 297
Query 143436 ACCACACAGGAACTGAACTGCCTGGTAGGTGTTCTGGCGCCCGCCATGATGGGCGTGGGC 143495
| || ||||| |||||||| | ||| || || | |||| | |||||| ||||| |||
Sbjct 298 AGTACGCAGGAGCTGAACTGACGGGTTGGGGTGCGCACGCCAGACATGATTGGCGTAGGC 357
Query 143496 AACGAAACCTGTCTTGTGGATACTGCATCATAAAAACGGCAAACGTGCTTCAGACGG 143552
| |||| || || ||||| ||||| || ||||| |||| | |||||||
Sbjct 358 AGAGAAATCTTGAACGTCGATACCGCATCGTAGAAACGCTTCACGTAATCCAGACGG 414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546490144683680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |