Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_028957.1 Length=171541 Score E Sequences producing significant alignments: (Bits) Value seq974 125 8e-24 >seq974 Length=31311 Score = 125 bits (138), Expect = 8e-24 Identities = 281/419 (67%), Gaps = 10/419 (2%) Strand=Plus/Plus Query 142884 TCAACGCCCTTGTTGTTCTTCAGAACGAGCAAATTTTCAACTTCCAAATGCCATAAAGGA 142943 ||||| || |||||| ||||| || |||| |||| ||||||| ||||| | ||| Sbjct 1 TCAACACCACGGTTGTTTTTCAGGACCAGCAGGCTTTCCACTTCCAGGTGCCACATAGGG 60 Query 142944 TAATAAGCAGTAGCAGCGCCGCCCCGGATTCCACCTTGTGAACAGGATTTAACAGCCGTT 143003 || | || ||||| ||||| || | || || || || |||||||| || ||||| Sbjct 61 TAGAACAGGGTCGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTTACCGCCGTC 120 Query 143004 TGGAAATGTTTCCAGAACGGAATAACACCAGTATGACGAA--CTTCACCCATACCGATTT 143061 ||||| || || ||||||| ||| || || || ||| ||||||| ||| Sbjct 121 TGGAAGTGCTTATAGAACGGGATACAGCCGGTGTG--GAATGCTTCACCG---CCGCGAA 175 Query 143062 TCGAACCTTCA---GCACGAATCATACCAACGTTGATGCCGATACCCGCACGCTTACTGA 143118 ||| | | ||||| || ||| |||||||||||||||| ||||||| | Sbjct 176 TCGGGCTGCCCAGCGCACGGATGCGACCGGCGTTGATGCCGATACCGGCACGCTGGGAAA 235 Query 143119 TATATTCGATGATTGAATTGGCAGTCTTATTGATTGACTTCAGGGAGTCTGCAGCTTCGA 143178 |||| | ||| | ||| || ||||| || | |||| ||| || |||| Sbjct 236 CGTATTTCACGATGGCGCTGGACGTGGCGTTGATGGAATCCAGGCTGTCACCACACTCGA 295 Query 143179 TAACCACGCAGGAACTGAACTGCCGGGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGG 143238 | | |||||||| |||||||| ||||| || || | |||| | |||||| || || | Sbjct 296 TCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTGCGCACGCCAGACATGATTGGCGTAG 355 Query 143239 GCAACGAAACCTGTCTTGTGGATACTGCATCATAAAAACGGCAAACGTGCTTCAGACGG 143297 ||| |||| || || ||||| ||||| || ||||| |||| | ||||||| Sbjct 356 GCAGAGAAATCTTGAACGTCGATACCGCATCGTAGAAACGCTTCACGTAATCCAGACGG 414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548790893088240