Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02]
1,794 sequences; 393,470,562 total letters
Query= NC_028957.1
Length=171541
Score E
Sequences producing significant alignments: (Bits) Value
seq974 125 8e-24
>seq974
Length=31311
Score = 125 bits (138), Expect = 8e-24
Identities = 281/419 (67%), Gaps = 10/419 (2%)
Strand=Plus/Plus
Query 142884 TCAACGCCCTTGTTGTTCTTCAGAACGAGCAAATTTTCAACTTCCAAATGCCATAAAGGA 142943
||||| || |||||| ||||| || |||| |||| ||||||| ||||| | |||
Sbjct 1 TCAACACCACGGTTGTTTTTCAGGACCAGCAGGCTTTCCACTTCCAGGTGCCACATAGGG 60
Query 142944 TAATAAGCAGTAGCAGCGCCGCCCCGGATTCCACCTTGTGAACAGGATTTAACAGCCGTT 143003
|| | || ||||| ||||| || | || || || || |||||||| || |||||
Sbjct 61 TAGAACAGGGTCGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTTACCGCCGTC 120
Query 143004 TGGAAATGTTTCCAGAACGGAATAACACCAGTATGACGAA--CTTCACCCATACCGATTT 143061
||||| || || ||||||| ||| || || || ||| ||||||| |||
Sbjct 121 TGGAAGTGCTTATAGAACGGGATACAGCCGGTGTG--GAATGCTTCACCG---CCGCGAA 175
Query 143062 TCGAACCTTCA---GCACGAATCATACCAACGTTGATGCCGATACCCGCACGCTTACTGA 143118
||| | | ||||| || ||| |||||||||||||||| ||||||| |
Sbjct 176 TCGGGCTGCCCAGCGCACGGATGCGACCGGCGTTGATGCCGATACCGGCACGCTGGGAAA 235
Query 143119 TATATTCGATGATTGAATTGGCAGTCTTATTGATTGACTTCAGGGAGTCTGCAGCTTCGA 143178
|||| | ||| | ||| || ||||| || | |||| ||| || ||||
Sbjct 236 CGTATTTCACGATGGCGCTGGACGTGGCGTTGATGGAATCCAGGCTGTCACCACACTCGA 295
Query 143179 TAACCACGCAGGAACTGAACTGCCGGGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGG 143238
| | |||||||| |||||||| ||||| || || | |||| | |||||| || || |
Sbjct 296 TCAGTACGCAGGAGCTGAACTGACGGGTTGGGGTGCGCACGCCAGACATGATTGGCGTAG 355
Query 143239 GCAACGAAACCTGTCTTGTGGATACTGCATCATAAAAACGGCAAACGTGCTTCAGACGG 143297
||| |||| || || ||||| ||||| || ||||| |||| | |||||||
Sbjct 356 GCAGAGAAATCTTGAACGTCGATACCGCATCGTAGAAACGCTTCACGTAATCCAGACGG 414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548790893088240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |