Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_028976.1 Length=50113 Score E Sequences producing significant alignments: (Bits) Value seq718 87.8 6e-13 >seq718 Length=85064 Score = 87.8 bits (96), Expect = 6e-13 Identities = 122/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 39514 GAAGTCGATGTCCACGTCGGGCATGGAGACGCGCTCAGGGTTCAGGAACCGCTCGAAGAT 39573 |||||||| ||| | |||||||||||| || || || ||||| ||||| || ||||| | Sbjct 5216 GAAGTCGACGTCGAAGTCGGGCATGGAAACACGTTCCGGGTTGAGGAAACGTTCGAACAG 5275 Query 39574 GAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCCCGAGGGCGTACGCGGCCAGCGAGCC 39633 || || | || || |||||||| || | || ||||| |||||||||| Sbjct 5276 CAGGTCGAATTCCAGCGGATCGAGGTCGGTAATTTTTAATGCATACGCCACCAGCGAGCC 5335 Query 39634 AGCCGCAGAGCCACGCCCAGGGCCGACCCACACACCGTTCTCCTTCGCCCA 39684 || | |||||||| || || || ||| || ||||| ||||||| ||| Sbjct 5336 CGCACCGGAGCCACGGCCCGGACCTACCGGTACGCCGTTATCCTTCGACCA 5386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160236586287100