Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_029000.1 Length=162327 Score E Sequences producing significant alignments: (Bits) Value seq955 86.0 7e-12 seq952 86.0 7e-12 >seq955 Length=33606 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 64250 TGGCAGTCCCTATTGGATTTGAACCAATGACCCGCGGCTTAGAAGGCCGCTGCTCTATCC 64309 ||||| |||| | ||||| ||||| | |||| ||||||||||||||| |||||||||| Sbjct 1428 TGGCACGCCCTGTAGGATTCGAACCTACGACCTACGGCTTAGAAGGCCGTTGCTCTATCC 1487 Query 64310 AACTGAGCTAAG 64321 |||||||||||| Sbjct 1488 AACTGAGCTAAG 1499 >seq952 Length=33737 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 64250 TGGCAGTCCCTATTGGATTTGAACCAATGACCCGCGGCTTAGAAGGCCGCTGCTCTATCC 64309 ||||| |||| | ||||| ||||| | |||| ||||||||||||||| |||||||||| Sbjct 12067 TGGCACGCCCTGTAGGATTCGAACCTACGACCTACGGCTTAGAAGGCCGTTGCTCTATCC 12126 Query 64310 AACTGAGCTAAG 64321 |||||||||||| Sbjct 12127 AACTGAGCTAAG 12138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519306754284880