Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plutella_20xylostella_20[refseq_20GCF_5F000330985.1_202014-10-02] 1,794 sequences; 393,470,562 total letters Query= NC_029042.1 Length=156833 Score E Sequences producing significant alignments: (Bits) Value seq974 95.1 1e-14 >seq974 Length=31311 Score = 95.1 bits (104), Expect = 1e-14 Identities = 110/147 (75%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 102611 TCTTCCAACACCTATTATGTCCGGCGTCCGCACCCCGACCCGACAGTTCAGCTCTTGTGT 102670 ||| || || || || ||||| ||||| |||||||| ||||| ||||||||||| || || Sbjct 360 TCTGCCTACGCCAATCATGTCTGGCGTGCGCACCCCAACCCGTCAGTTCAGCTCCTGCGT 301 Query 102671 ATTGATC-AAACTGGTGACACATTGGACTCAATTAATGCCACTGCGAAAAGCATCGTGGA 102729 | ||||| | |||||||| |||| || || || ||||| | | ||||||| | Sbjct 300 ACTGATCGAGTGTGGTGACAGCCTGGATTCCATCAACGCCACGTCCAGCGCCATCGTGAA 241 Query 102730 TTATGTTTCCAAACGTGCTGGCATCGG 102756 || |||||| | ||||| || ||||| Sbjct 240 ATACGTTTCCCAGCGTGCCGGTATCGG 214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 501726348534320